Gene Tpet_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0260 
Symbol 
ID5170415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp249248 
End bp250162 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content46% 
IMG OID640562763 
Producthypothetical protein 
Protein accessionYP_001243865 
Protein GI148269405 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCTGGAA AACGAAGAGG TTTCTTCGTT GCTTTTTTAA TAACGTTTCT GATTCTCGTG 
ATCGTGTTCA TGTACGGCTA CATCTCCTTT GAAATAAACA GGCTTTACGG TGGAAGGATG
TCTCCTTTTG AAGACTGGAG GAGTTATATT GCTTTTCTTG CCTCTAAGGT ACCGTTTTTG
AAAGACAGAA TCAACTATCA ACCCCTCAAA GCGGAAAGTC CCGCCGAGTA CTACTCGAGA
ATCTATCAGA AATACATCGA GATATACAAC CAGAAGATAG ACGAACTGAT CAGCAAAGAA
AAAGAGCTCG AAGAACAGGC GAAAGTGCTA GACACACAGA AGAATGTCGT TGAGAGAATG
ATCGAAGAGA TTCAATCTCT CAAAAATCAG TTGCTCGAAG AGAAAAACAG ACTGGAATCC
TACAAGAAGC AGGTGGATGA ACTCGTCAAC GTGCTTTTGA ACACCGCTCC GAGGAATCTT
GCGGGCGCGC TCAACGAAGT GGACGATGAA ACACTCGCCG TGATCTTTAA AAGAACCGAT
CCAGAGTACG CCGGGGAGTT CCTCGAGGCG CTCGCCGGTG TCAATCCGCA GAAAGCTGCA
CGGGTGATGG AGCTCATGGT GGGTGTAGAA AGCACCATTG AAAGACTCGA AATGCTGGTT
AAACAAGCTC AGGAAGCGGT GAAACAGATG ACAGAAAAAG AATCTCAGCT TTTTCAGAAA
GAAGCCTATT TGAAATCGGT GGCGGACGCT TTGAACAACA TCACACCAGA GGTAGCCGTC
GATTTCCTGA GAAGGGAGAA TGTGGATCCA GAAACTTTGA GAACGGTTCT TTCCATGATG
GATAGGGAAC ACGCTTCTGT TCTGGTTCAG TACATAGTTC AGAACGCTCC GGATCTTCTG
GAGGAGAGAA AGTGA
 
Protein sequence
MPGKRRGFFV AFLITFLILV IVFMYGYISF EINRLYGGRM SPFEDWRSYI AFLASKVPFL 
KDRINYQPLK AESPAEYYSR IYQKYIEIYN QKIDELISKE KELEEQAKVL DTQKNVVERM
IEEIQSLKNQ LLEEKNRLES YKKQVDELVN VLLNTAPRNL AGALNEVDDE TLAVIFKRTD
PEYAGEFLEA LAGVNPQKAA RVMELMVGVE STIERLEMLV KQAQEAVKQM TEKESQLFQK
EAYLKSVADA LNNITPEVAV DFLRRENVDP ETLRTVLSMM DREHASVLVQ YIVQNAPDLL
EERK