Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0200 |
Symbol | |
ID | 5170624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 192842 |
End bp | 194986 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640562702 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001243805 |
Protein GI | 148269345 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAATC GAACAGAGAT TGAGACAGAA GCGAGAGAAG TAATTAGAGA CCTGGAAAGT CTCAGAAAAA AGAGCTTCAC AAGAGAGGAG AAAAAACTCC TCACAAAGGC TTATGAGTTT GCTCGAATCG TTCATGAAGG TCAGAAGAGA TTTTCTGGAG AACCCTTCAT AACCCATCCC GTTGAGGTCG CAAAAATCCT TGCGGCTCTG GGAGTCGATG TGACGACTCT GGTTGCGGCT CTTCTGCACG ATGTTGTTGA AGACGGTGAA AATGTCAGCC TCGATCAAAT AAAAAAAGAG TTTGGGCCTG AATTGGCCAG GATCGTGGAT GGTGTCACAA AAGTCAGCAA TATAAACGCA CCGATCGGGA GCGATCAAGA CTCTCGAAAA AAGATAGAAA CCATACAGAA AATGTTTCTT GCAATGGCGG AGGACATGAG AGTTATATTC GTAAAACTCG CCGATCGTCT TCACAACATG CGCACCATTC ACTACGTTCA GGATCAGGAA AAGAAGAGGT ACAAAGCCTA CGAAACCCTC GAGATCTACG CACCTCTGGC TCATAAGCTC GGAATCTACT CGATAAAGTC TGAACTCGAA GACCTGGCTT TCAAGGTGCT GTACCCGGAG GAGTACTACA AGATAAAGGA ACTCGTCGCT GAGAAGAGAA AAGAGAGAGA AAAGAGAACC AATGAATACA TCTCCCTTCT CAAAAGTGCT TTGGAAGAGC ACAAGATAAA AGCAATTGTG GAGGGAAGGT ACAAACACTA TTACAGCATA TGGAAGAAAA TGAAGGAAAA AGAAAAAAAA TTCGAAGAAA TCTACGATTT GATCGCTCTG AGAGTGATAG TGAAAGACGT GACCACCTGC TACACCGTCC TGGGGATCGT TCACAACATC TGGAAACCAC TTCCGGGAAG GTTCAAAGAC TACATCGCTG CACCGAAATC GAACGGCTAT CGTTCACTCC ACACAGCTGT GATAACGGGT TACGGTGAGC CTCTTGAGAT ACAGATAAGA GACGAGGAGA TGCACAGAGA GGCCGAGTAC GGTTTGATTG CTCACTGGAT ATACAAGGAA AAACCTGACC TGAAAACAGC GAAAGAATGG ATAGAAAGAC TCCTCGATTG GAGAAAAGAA CTTGCCCAGG GATTCACCGA ATTTGAGGAT ATCAAGAAAG AGCTCCAGAT GGATGAAGTT TTTGTTTTCA CCCCGAAAGG AGATATCATC CACCTTCCCA AGGGTTCCAC ACCAATTGAC TTCGCGTACG CGATACATAC AGAGATAGGG CATCACTACA GTGGAGCAAA GGTGAACGGA AAGATCGTTC CTATCGACTA TCAGCTGAGA AACGGAGATG TTGTTGAAAT AATCGTCAAC AAGAACTCTC CAGGTCCAAG TGTTGATTGG CTGAAGTACG CCAAAACCCA CAGCGCGCGA GCAAAAATCA GAAGGTTTCT GAAGGAAAAA CTCGCGCCCG AACTCGTAGA AAGAGGAAAA GAAGTTCTCA GAAAGATCTG CCGAAAGCTC GGAAAATCCT TCGAAGAAGT GATGCAAACG GAAGGAATCA AAAAGTATTT GAACGCGTAC CAGGAAAAAG ATTTCTTCAT GAGAATCGGA GAAGGTAGTA TTACCACACA AGATCTCATA GAAGCGATTC TGGGAAAAAA GATCGTTGTG AAAAAGCGTT CCACAAAGAA AAAGGTGAAG ATGCAGAATC TTGTGAAGGT AGATGGAATA GACAGTATAG AGTTCCACAT TGCGAAGTGT TGTCATCCGA TCATGGGCGA TCCCATAGTG GCCGTTGTCA GTAAAAGAGG CATGACCATA CACAGAAGGG ATTGTAGAAA CCTGAAGAAC ATGTCACAGG ACCGAATATT CTCAGCTGAA TGGAACCTTG AAACTTCAGA AATGTTCGAT GCACACATAA GGGTGGTCCT TGACTCGGAA AAAAACCTTC CGAGTTTGAT AGATCGAATA ACGAACCTCG GTGCGGAATT TGTGGCCATG AAGACTCTGA AATCAGAAGA ACCACCTGTT GTGCAAATTC ATATAAAAAT ATCCAACACC ACCGAGCTCT CCGGTCTTCT CGATAGGCTC AGATCCTACA GATACGTTCT GGACGCGGAA AGGGTGGTGC AATGA
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Protein sequence | MINRTEIETE AREVIRDLES LRKKSFTREE KKLLTKAYEF ARIVHEGQKR FSGEPFITHP VEVAKILAAL GVDVTTLVAA LLHDVVEDGE NVSLDQIKKE FGPELARIVD GVTKVSNINA PIGSDQDSRK KIETIQKMFL AMAEDMRVIF VKLADRLHNM RTIHYVQDQE KKRYKAYETL EIYAPLAHKL GIYSIKSELE DLAFKVLYPE EYYKIKELVA EKRKEREKRT NEYISLLKSA LEEHKIKAIV EGRYKHYYSI WKKMKEKEKK FEEIYDLIAL RVIVKDVTTC YTVLGIVHNI WKPLPGRFKD YIAAPKSNGY RSLHTAVITG YGEPLEIQIR DEEMHREAEY GLIAHWIYKE KPDLKTAKEW IERLLDWRKE LAQGFTEFED IKKELQMDEV FVFTPKGDII HLPKGSTPID FAYAIHTEIG HHYSGAKVNG KIVPIDYQLR NGDVVEIIVN KNSPGPSVDW LKYAKTHSAR AKIRRFLKEK LAPELVERGK EVLRKICRKL GKSFEEVMQT EGIKKYLNAY QEKDFFMRIG EGSITTQDLI EAILGKKIVV KKRSTKKKVK MQNLVKVDGI DSIEFHIAKC CHPIMGDPIV AVVSKRGMTI HRRDCRNLKN MSQDRIFSAE WNLETSEMFD AHIRVVLDSE KNLPSLIDRI TNLGAEFVAM KTLKSEEPPV VQIHIKISNT TELSGLLDRL RSYRYVLDAE RVVQ
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