Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0195 |
Symbol | |
ID | 5170571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 189358 |
End bp | 190665 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562697 |
Product | tRNA (uracil-5-)-methyltransferase Gid |
Protein accession | YP_001243800 |
Protein GI | 148269340 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGTGA ATGTCATCGG AGCAGGGCTC GCGGGTTCAG AGGTGGCTTA CAACCTTGGA AAAAGGGGAA TAAGGGTTCG TCTTTTTGAA ATGAGACCGA AGAAGATGAC TGAAGTGCAC AAAACAGGAT ATTTCGCGGA GCTTGTTTGC AGCAACTCTC TCAAATCGGA AGACATAACG AACGCCGAAG GACTCCTGAA AGCTGAAATG AAGCTGATGG GTTCTATAAC ACTAGAAGCT GCAGAGAAAG CACGTGTCCC ATCTGGAAAG GCCCTCGCGG TGGATCGTAA CATCTTCGCG AAGGAAGTGA CAGAGGCCAT AGAAAGTCTT GAGAGTGTGG AGGTCATCAG AGAAGAAGTA ACCGAATTCG ATCCAGAAGA AGGATTATGG GTTGTAGCGA CGGGACCAGC CACATCGGAT GGTTTATTCT CTTTTTTGAG AAACCTCCTC GGTGATGATT TTCTTTTCTT CTTCGATGCC GTCTCTCCGA TTGTGACCTT TGAGTCGATA GACATGGAAC ACGCTTTCTG GGGAGACCGA TTTGGGAAGG GAAAGGATTA CATAAACTGC CCTCTCACTG ATGGGGAATA CGAAGAACTC TGGAAAGCAC TCGTTGAGGC CGAAGTTATA GAAATGGAGG ATTTCGATCG AAAGCTCCTC TTCGAACGCT GCCAGCCCAT AGAAGAAATA GCGAGAAGCG GAAAAGACGC GCTGAGATAC GGCCCTTTGA GACCAACAGG TCTGGTGGAT CCAAGAACGG GTAAAGAACC CTACGCAGTT GTTCAGCTTA GAAGGGAGGA CAAAGAGGGT AGATTCTACA GTCTCGTTGG ATTTCAGACC AGATTGAAAT GGAATGAACA GAAGAGAGTT CTGAGAAAGA TCCCTTGTCT CAGAAACGCC GAGATCGTAA GGTACGGTGT CATGCACAGG AATGTTTACA TAAACTCACC AAAGTTGCTC GATATCTTTT TCCGGCTGAA AAAGCAGCCT AACATCTTCT TCGCTGGTCA GATTACAGGG GTGGAGGGAT ACATGGAATC CGCCGCGTCG GGAATCTACG TGGCTTACAA TGTCTATCGT ATTTTGAAAG GACTCTCTCC GTTAAAACTT CCCGAGGAGA CCATGATGGG AGCGCTCTTC AGTTATATAA TAGAGAAGGT CGAAGGAGAT CTGAAGCCGA TGTACGCAAA TTTTGGACTT CTTCCTCCGC TGAAAACCCG TGTGAAAGAT AAATTCGGGA AAAGAAAAAA ACTCGCAGAA AGAGCCATTG AAGCGATGAG AAAATTTCTG GAAGAGTATC CCTGGTGA
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Protein sequence | MIVNVIGAGL AGSEVAYNLG KRGIRVRLFE MRPKKMTEVH KTGYFAELVC SNSLKSEDIT NAEGLLKAEM KLMGSITLEA AEKARVPSGK ALAVDRNIFA KEVTEAIESL ESVEVIREEV TEFDPEEGLW VVATGPATSD GLFSFLRNLL GDDFLFFFDA VSPIVTFESI DMEHAFWGDR FGKGKDYINC PLTDGEYEEL WKALVEAEVI EMEDFDRKLL FERCQPIEEI ARSGKDALRY GPLRPTGLVD PRTGKEPYAV VQLRREDKEG RFYSLVGFQT RLKWNEQKRV LRKIPCLRNA EIVRYGVMHR NVYINSPKLL DIFFRLKKQP NIFFAGQITG VEGYMESAAS GIYVAYNVYR ILKGLSPLKL PEETMMGALF SYIIEKVEGD LKPMYANFGL LPPLKTRVKD KFGKRKKLAE RAIEAMRKFL EEYPW
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