Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0105 |
Symbol | pheT |
ID | 5170320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 96155 |
End bp | 98521 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562604 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001243710 |
Protein GI | 148269250 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000297974 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAGTTC CCGAGTCTTG GCTCAGAGAA TTCGTAGATC TCGACTGGGA CATCGAGCAA ATAGCGGAAA GACTCACTTT TTCTGGCACG AGTGTGGAGG ATATTCTGAG ACCTTTCAAC GTTTCCGGAG AGATAATCAC AGCGAGGGTG ATAGAAAGGT TCGATCATCC CGCCTCAGAA AAGCTCATCG TGTGCAAGGT GGACACCGGA AAGAGAATCT ACACGGTCAT CACAGCCGAT AAAACCGTGA ACGAAGGAGA CTACGTCATA CTGGCTCTCG AAGGAGCTAC CTTGAACAAC GGTCTCAAGA TAGAGCCTCG TGAGTTCAAA GGGGTTATCT CGGAGGGTAT GCTTTGCTCA CTTGAAGAAT TGGGACTTGA GGAAAAATCC GACAGAGTTT ATCGTTTCCC TGATCCCGTG GAGCTCGGTG TGAACGTGGT AGAGGAATAT GGACTCAACG AAAGAGTCCT GGACATAGAG ATAACTCCAA ACAGGCCTGA TTGTCTTTCG ATTATTGGTG TTGCGAGAGA GCTTTCTGCC CTCAGCGGAA GGCCTTTGAA TAAGCCTCAA CCCGATGTTT CTTTTGTGGA TGAAGATGTT CAGTTCGATG TGGAGATAGA AGACGTGGAG GGTTGTCCCA GATACTCTGC TCGAATAATG AAAGGTGTCA CCGTGAAGGA TTCGCCGCTC TGGATGAAGG CGAGGCTCGT AGCGGCAGGG GTTCGTTCTC TGAACAACGT GGTCGACGCC ACGAACTACG TGATGATCGA GCTGGGACAT CCCGTTCACG CGTTCGATCT GAACAGGCTC AAAAACAAGA TAATCGTTGT GAAATCTGCA AAGGGTGGAG AAAGAGTCCT GCTACTCGAT GAAAAGGAGT ACAAACTGAA GGGCGGAGAG ATCTTGATAA CGGACGGTGA GAACGTCCTC GCACTTGGCG GAATCATGGG AGGAATGGAA TCTGGTGTGT ACGATGACAC CAGAGATCTG GTGCTGGAAG TGGCTTACTT CGATCCTGTG AGGATAAGAA AGGCATCCAA AGCGCTTGGA ATCAGTTCTG AGTCTTCTTA CAGGTTCGAA CGAGGTGTGG ATCCGAACGA TGTGGAACTT GTGTCTTTGA GGCTTGCAGA ATTGATTCAA AAGCTGGCCG GCGGTCATGT TCTTGGGAAA TTCTGGGATG TTTATCCTCG AAAGATAGAA TCCAAAAAGG TGATGCTCAG AAAAGCCAGA ATCGAAAAGA TACTGGGAAC GAAAGTTGAA GAGCCGGGCA ATATTCTCAA ACGCCTTGAA TTCCAGGTGG AGGACAGAGG AGACAGTTAC GAAGTTCTTG TTCCCACCTT CAGACCGGAC GTTGAAAGGG AGATAGACCT CATAGAAGAG ATAGGAAGGA TTTACGGGTA CGAGAAAGTC GAATCGAAGG TGATAAGCGT TCCTGCAATA AACCGTGGCT GGGACGAGAA ACAGCTCTTC AGAAGGGAAA TTTCTCAATT CATGAAAGGA ATGGGTTTCG ATGAAGTGGT GACTTTCTCT TTTGTGGATT CCCAGAAGGT TAAAAGATGG CCTCTGGTGG GCAGAGAACC CATAACTCTC TCCAATCCTA TCGTTTCAGA TATGGACGTG ATGAGAACGT CACAATTTTA CAGCCTGATA CAGGTGCTCG CTGAGAATTT CAAGAGGCAG AACAGGGATC TGAAACTCTT CGAAATTGGA AAGGTTTACT TCAAGGAGAA CGGAAACTTC ATGGAGATAG AGACGCTCTC TGCGATGAGC TGTGGTTTGG AAAATCCGGG AGACTACACC GATAAAAGAA ACGTGTCCTT CTACACGACC AAAGGAATTC TCGATGAACT CTTCTTCAGG TTCGGTGTGA ATGTCGAATA CAGAGTCGCG GAGATACCTG GATTGTTCCC GACTAGATCC GCTCGCATCT ACGTGGAAAA CAGGGAGATC GGTTTCATTG GAATGGTTGA TCCAAAGCTC CTCGATGAGT ACGATGTGAA AGAAGACACC TACTTCTTCG AGATAGACAT GGAACTTCTG AGAGAATGTG CATCGAAGAG ACCTGCTTAC AGGCCCACAC CAAAATTTCC TGCTGTGAGA AGAGATATCT CCTTCCTGCT TCCGAAGGGA TTCGAGTCTG TGAAGATCAT CGAACTTTTC AAAAAGAGCG GAGGAGATCT GGTGGAGGAA GTGGGAGTGT TTGATGTCTA TGAAGGAAGA GGAATCCCGG AGGATATGGT GAGTGTTACA TTCTATGTGG TGTTCAGGCA CCCGGAAAGA ACTCTGACCG ACGAAGAAGT GAACAGAATT TTCGAAGAGA TGGTACAGAA AACGGAAGAG GAGTTTGGAA TAAGAAGAAG ATTCTGA
|
Protein sequence | MRVPESWLRE FVDLDWDIEQ IAERLTFSGT SVEDILRPFN VSGEIITARV IERFDHPASE KLIVCKVDTG KRIYTVITAD KTVNEGDYVI LALEGATLNN GLKIEPREFK GVISEGMLCS LEELGLEEKS DRVYRFPDPV ELGVNVVEEY GLNERVLDIE ITPNRPDCLS IIGVARELSA LSGRPLNKPQ PDVSFVDEDV QFDVEIEDVE GCPRYSARIM KGVTVKDSPL WMKARLVAAG VRSLNNVVDA TNYVMIELGH PVHAFDLNRL KNKIIVVKSA KGGERVLLLD EKEYKLKGGE ILITDGENVL ALGGIMGGME SGVYDDTRDL VLEVAYFDPV RIRKASKALG ISSESSYRFE RGVDPNDVEL VSLRLAELIQ KLAGGHVLGK FWDVYPRKIE SKKVMLRKAR IEKILGTKVE EPGNILKRLE FQVEDRGDSY EVLVPTFRPD VEREIDLIEE IGRIYGYEKV ESKVISVPAI NRGWDEKQLF RREISQFMKG MGFDEVVTFS FVDSQKVKRW PLVGREPITL SNPIVSDMDV MRTSQFYSLI QVLAENFKRQ NRDLKLFEIG KVYFKENGNF MEIETLSAMS CGLENPGDYT DKRNVSFYTT KGILDELFFR FGVNVEYRVA EIPGLFPTRS ARIYVENREI GFIGMVDPKL LDEYDVKEDT YFFEIDMELL RECASKRPAY RPTPKFPAVR RDISFLLPKG FESVKIIELF KKSGGDLVEE VGVFDVYEGR GIPEDMVSVT FYVVFRHPER TLTDEEVNRI FEEMVQKTEE EFGIRRRF
|
| |