Gene Tpet_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0068 
Symbol 
ID5171724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp62215 
End bp62565 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content46% 
IMG OID640562566 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_001243673 
Protein GI148269213 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGA TCATCTACGC AGCAGCTCCA GGTGCTTCGA ACGGTACCAC CACAACCACA 
ACAGGTGGTG GCTGGGGAAG TCTACTCTTC ATGCTGATAT TCTTCATAGC TATTTTTTAC
TTCATGATCA TCCTTCCCCA GAGGAGAAGG GAAAAACAGT TCCAGCAGAT GATAAGTCAG
ATGAAACGAG GAGACACGGT CGTCACAATC GGAGGAATTG TCGGGAAAGT CATCGATATC
AAAAAAGACA CCGTCAAGAT CAAAACGGCA AATTCCACGG AACTCGAGAT AACAAAAAGA
GCTATTTCCA CGGTTATAAA GGAGAGGTCA CAGGAAGATC AGGAGGGATG A
 
Protein sequence
MPEIIYAAAP GASNGTTTTT TGGGWGSLLF MLIFFIAIFY FMIILPQRRR EKQFQQMISQ 
MKRGDTVVTI GGIVGKVIDI KKDTVKIKTA NSTELEITKR AISTVIKERS QEDQEG