Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0043 |
Symbol | |
ID | 5171126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 38027 |
End bp | 39370 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640562541 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001243648 |
Protein GI | 148269188 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0628937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGGTAC TTCTCGTTAA TCCGTGGATT CACGATTTTG CGGCGTACGA TTTCTGGTTG AAGCCCATCG GCCTTCTTTA CGTTGCTCGC GCAATGGAGT GGATGGGTTA CGAGGTCCAT CTCGTGGATC TTCTCAACAG ACACGATCCC GATCTTCCGA GATTTGCGAG AGTGCCAAAA GACAAAAGAT ACGGCACAGG AAAGTTTCCA AGTCAGGTTA TAGAGAAACC AGAGATGTTG AAATCTGTTC CAAGAAGGTA TAAGAGGTAC GGAGCACCTC CAGAGTTTCT GGAGTGGAAA TTGAGAGAAA TCGGAAACGT TGATCTCATA ATGGTCACGT CCACGTTGAG CTACTGGTAT CCCGGAGTGT GGGAAACGAT TCGCTTTTTG AAGAGTCGCT ACGACGTACC GATCGTTCTG GGAGGTGTCT ACCCGCGGCT CTTTCCGGAA CACGCGAAGA AGAGCGGAGC GATAGTCTAT GAAAAGGGCG ATCTCGTGTT TCTTCCCAGC TTCTTAGAGT CTCTGGGATT TCCATCGAAG GAAATCCCCG CTGACTGGTT CGAAGTCTTC GATCCCATGT ACGAACTCTA CAACAGAGTT GGTTATCTCG TGTTCATCAC CACACTTGGA TGTCCTTTCA GGTGTTCTTA CTGCGCTGTT CACCGACTCT GGAACGGTTT GAGAGTAAGA ACACCGGAGA GAGTGGTTGA AACCATAGAG AAGTACCTGA ACATTTTCAA AGTTGAAGAT GTGGTCTTTT TCGATGATGC TATTCTGGCC TCGGGAAGGT TCAAAGATCT TCTCAAACTG ATCGTAGAGA AGAGGTGGCC TGTACGGTTT CATCTCCCGA ACGGGATACA TGCACGTCTT CTCGATGAAG AAACGGCCTT CCTTTTGAAA GAAGCGAACT TCAGGACGAT AAAACTGGGC TATGAAACTT CTGGAAGGCT CCAGAGGGAA ACAGGCGGTA AGGTCTACGA CGAGGACCTC GTTCGCGCAG CCAGGATCTT GAGGAAAGCT GGTTTCACCG AAAAAGAAGT CTCAGCGTAC ATCATGGTGA ACATGCCGGG GCAGACGAAA GAGGATGTGC TGAACGCCAT CAAGGTGTGT TTGAGTGAAG GAATAGGTAT TTCCATAAAC GAATACACTC CCATTCCGGG AACAAAAGAC TGGGAAAAAC TCGTCGAAGA AGGCAAGTTG GACCCGGATA TCGATCCCGT TCTTTTGAAC AACACGGTTC TTCCCTTCTG GTGGAAGTAC GGTATGAGTT ACGAAGAGAT CCAGGAGATA AAAAACTTCG CTCAGAAACT CAAGAAATCA GAGGTTTACA GAGAATTTCC GTGA
|
Protein sequence | MKVLLVNPWI HDFAAYDFWL KPIGLLYVAR AMEWMGYEVH LVDLLNRHDP DLPRFARVPK DKRYGTGKFP SQVIEKPEML KSVPRRYKRY GAPPEFLEWK LREIGNVDLI MVTSTLSYWY PGVWETIRFL KSRYDVPIVL GGVYPRLFPE HAKKSGAIVY EKGDLVFLPS FLESLGFPSK EIPADWFEVF DPMYELYNRV GYLVFITTLG CPFRCSYCAV HRLWNGLRVR TPERVVETIE KYLNIFKVED VVFFDDAILA SGRFKDLLKL IVEKRWPVRF HLPNGIHARL LDEETAFLLK EANFRTIKLG YETSGRLQRE TGGKVYDEDL VRAARILRKA GFTEKEVSAY IMVNMPGQTK EDVLNAIKVC LSEGIGISIN EYTPIPGTKD WEKLVEEGKL DPDIDPVLLN NTVLPFWWKY GMSYEEIQEI KNFAQKLKKS EVYREFP
|
| |