Gene Tpen_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1879 
Symbol 
ID4600307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008696 
Strand- 
Start bp25066 
End bp25800 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content58% 
IMG OID639772477 
Producthypothetical protein 
Protein accessionYP_919137 
Protein GI119709797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0669218 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGCTACC CCCATGTAGT TGTCAATCCA TACGTGTACT ACGACTGGGA GCAGTGGCTG 
AAGAAGTGTA GACCTGAGGG CGTCTTAGTC GATACGGGTG TCCACAAGGT GTTTAAGGAG 
TCGGGGGGCT TCGAGTACCC CTCGGGCTTC GAGTACGGCT ATGCTAGGTT CATCTCTAGG 
GTTCACGCTC AGGCTAGGGT CGAGGAGTTC TACTACGTGA TTCCGGACTA CCCCTCGGAC 
TACCCGGGGA TGGAGCAATT CTACCCCCTC AACGTCGAGA AGACGTTAGA GAGCATCAAG 
CGGTGGCTGA CGCGCGTCGA TAGCCTGCCG GGCACGGCTG TAGCCGTGGT GCAGGGTAAG 
AAGGACGACC CCTTGAGCCC CGTCAGGGTG TACTCGGAGA ACAGGGAGCT ATACGACGAG 
TTCGAGCTTG TAGCCTTGGG CCCCACCTGT GCCAGCAATA GGTGGGGGGT CTTGGCTAAG 
ATGATTCTAG CCTTTGACTC CGTGACGGCT AAGCCTTTCC ACGTCTTCGG GCCGAGCCTC 
AGGGCTGTGG CGCGCGTGGC TGGGAGGACT AGGCGGTTCT TCAGCTTCGA TAGTAGCGCT 
ATGTACCGGT GGTGCGAGAA CAGCTGGTGT AGCGATATCG AGGAGAGGGC TGAGGCTATA 
CGCGCCTATA TCTCGCGCTA CGAGGAGATA GCGAGGAGGT GGGGGTCTCA GCCCTCGATT 
TTATCGTTCT TTTAG
 
Protein sequence
MCYPHVVVNP YVYYDWEQWL KKCRPEGVLV DTGVHKVFKE SGGFEYPSGF EYGYARFISR 
VHAQARVEEF YYVIPDYPSD YPGMEQFYPL NVEKTLESIK RWLTRVDSLP GTAVAVVQGK 
KDDPLSPVRV YSENRELYDE FELVALGPTC ASNRWGVLAK MILAFDSVTA KPFHVFGPSL 
RAVARVAGRT RRFFSFDSSA MYRWCENSWC SDIEERAEAI RAYISRYEEI ARRWGSQPSI 
LSFF