| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1824 |
|---|
| Symbol | |
|---|
| ID | 4602061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 1766430 |
|---|
| End bp | 1767839 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639774597 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_921222 |
|---|
| Protein GI | 119720727 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.372731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAAAC ACTACGACGT GATAGTATTC GGTACAGGCT CGGCTATGAA CATTGTATCG
GAGCTCATAA ACGAGGGAAA AAGGCTGAGG TTCGCCGTAA TAGAGAACAA CATGGTCGGA
GGAATCTGCT TAACGAGGGG CTGTATCCCC TCCAAGATGC TACTGGAAGT CGCCAGGAAC
ATTAGGCGCA TAAAGGAAGC CGAGAAGTTC GGCATCCAGG TAAGCCTGGC GGGGGTTGAC
TTCACAGGAG TCATGGAGCG CGTGTGGAGG AGGATATACG CCGAGAGCAA GGAGATAGAG
CACTCGCTGA AACACCACCC GCTGATAGAC CTCTACCAAG TTGACGGCAC GTTTGTCGGA
GACTACACAG TGGACGTTGG GGGCAGGGAG ATAGAGGGGG ACACGATACT CCTCTGCACG
GGGTCTAGGC CCCACGTAGT CAAGGCTCCA GGAGTAGAGG AGGTTAAGTA CTACACGAAC
GACAACTTCT TCAGGGAGTT GCGGAAGCTC CCGAGGAGAA CGGTCGTTAT AGGCGGAGGG
TTCGTGGGGC TGGAGCTGGG CTTCTTCCTG GCGATGATGG GTAGCCAGGT CACCGTACTG
CAGAGGAGGG AGAGGATCCT CCCCGAGGAG GAGCCCGAGA TCTCGGAGCT CCTGGCGAGG
GATCTTTCAA GGTACATGGA CATCAGAACG CTCCACGAGG TGGTGGAGTT TCGCAGGAGC
GGGGAGAGGC AGATAGTGGT AGCTGAGAAT AAGGCTACTG GGGATAACGT GGAGTTCGAA
GCTGACGCCA TACTAATGGC CGCCGGCAGG GAGTCCTACA GCGACATAAC AAGGCCCGAG
AAGACCGGCG TGAAGACGGA CGAGAAGGGG TGGATATTGG TCGACGAATA TCTCAGGACG
ACTAAGGACG GTGTATGGGC TTTCGGAGAC GCGACGGGCA AGATGATGTT CAAGCACAAG
GCTAACTACG AAAGCGTGAT AGTGTACAGG AACGCCTTCA GGGGGGAGAA CGTAAAGGCG
AGGTACCACG CGGTTCCCCA CGCTGTCTTC ACAGAGCCGG AAGTCGCGAG CGTAGGGCTT
AAAGAGGAGG AGGCGGCGAA GAAGTACGAC ATACTCGTAG GCATCGCCGG CTACGAGGAG
ACAGCGAAGG GAGAGGCTAT GATGCTTCAC GACTACTTCG TGAAGGTGAT ACTAGACAGG
GATACGTTCA GAATCCTGGG AGCCCACATA ATAGGCCCAG AAGCATCCAT ACTGATACAG
GAAATAGTGA ACCTGATGTA CGCCGGCGAC GGGACGGCGG AGCCTATATA CGAAGGCATG
CACATACACC CCGCCCTCTC AGAGGTCGTG GAGAGGGCCT TCTTCCACCT ACACGAGCCC
GGAGAGTGGA GAAGACACGC TCACCACTGA
|
|---|
| Protein sequence | MVKHYDVIVF GTGSAMNIVS ELINEGKRLR FAVIENNMVG GICLTRGCIP SKMLLEVARN
IRRIKEAEKF GIQVSLAGVD FTGVMERVWR RIYAESKEIE HSLKHHPLID LYQVDGTFVG
DYTVDVGGRE IEGDTILLCT GSRPHVVKAP GVEEVKYYTN DNFFRELRKL PRRTVVIGGG
FVGLELGFFL AMMGSQVTVL QRRERILPEE EPEISELLAR DLSRYMDIRT LHEVVEFRRS
GERQIVVAEN KATGDNVEFE ADAILMAAGR ESYSDITRPE KTGVKTDEKG WILVDEYLRT
TKDGVWAFGD ATGKMMFKHK ANYESVIVYR NAFRGENVKA RYHAVPHAVF TEPEVASVGL
KEEEAAKKYD ILVGIAGYEE TAKGEAMMLH DYFVKVILDR DTFRILGAHI IGPEASILIQ
EIVNLMYAGD GTAEPIYEGM HIHPALSEVV ERAFFHLHEP GEWRRHAHH
|
|---|
| |