Gene Tpen_1814 details

Gene Information

• Locus tag: Tpen_1814
• ID: 4602051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 1756827
• End bp: 1757480
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639774587
• Product: phosphoribosyltransferase
• Protein accession: YP_921212
• Protein GI: 119720717
• COG category: [R] General function prediction only
• COG ID: [COG1926] Predicted phosphoribosyltransferases

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.055799
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTTAGGG TTTTTCGCAA CAGGGAGGAC GCCGGGAAGC AACTGGCCGA GAAGCTCCTC 
GCGGAGGGGG TAGGCGGTCC CGACGTGAAG GTTCTAGGCA TTCCCAGGGG AGGGGTTGTG 
GTCGCTAAAT CCGTGAGCGA GGCTCTGGGC GTACAGCTGG ATGTCGTTGT CTCGAGGAAG 
CTCAGAGCGC CCGGGAACCC CGAGCTAGGC ATAGGCGCCG TCGCCGAGCT AGACGCGGTC 
TACATCAACA GGGAGATAGT CGATGCTTTA GGCATCGGCG AGGACTACAT AAGGAGCGAG 
GTAGAGTACC AGAGAAGGGT CGTTGCCAGC TACGTCGAGA AGTTCCGCGG AACCGCCCTC 
GACCTGAGAG GCTTCACGGC GGTAGTCGTA GACGATGGGG TGGCCACCGG TGCAACGGTG 
ATCGCTGCCA GCATTGCCGC CAGGAAGGCG GGAGCCGAGA AGGTGGTAGT AGCTACGCCC 
GTTATCGCCC GGGACGTGCT GGGCGTCGTG TCCAGGTACG CGGACAAGGT TGTCGCCGTC 
ACGGTTCCGC TCATTCTCTA CGCGGTGGGC GAGTTCTACC GAGACTTCTC CGAGGTAACG 
GACAGCGACG TCCTAAGGGC GCTGGGGAGG TCTCCGGAGA GGAGGGGCGG CTAG 

 

Protein sequence

MVRVFRNRED AGKQLAEKLL AEGVGGPDVK VLGIPRGGVV VAKSVSEALG VQLDVVVSRK 
LRAPGNPELG IGAVAELDAV YINREIVDAL GIGEDYIRSE VEYQRRVVAS YVEKFRGTAL 
DLRGFTAVVV DDGVATGATV IAASIAARKA GAEKVVVATP VIARDVLGVV SRYADKVVAV 
TVPLILYAVG EFYRDFSEVT DSDVLRALGR SPERRGG