| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1781 |
|---|
| Symbol | |
|---|
| ID | 4601925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1723632 |
|---|
| End bp | 1724858 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639774554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_921179 |
|---|
| Protein GI | 119720684 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1602] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.420312 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAGC GCGCGGCGGC CACGTGCCTG CAGTGCAGGG GGGCTAAGAG GCTCTGCGGT
AAGAGTAGCT GCCCTGTGCT CGACTTGTGG CTAGCACTCG AGAGGGTCAG GGTTCCGGAG
ACAAGAGAGA TCGACGGTTA CTCTCCGCCC ACCGTTTTCG TCGGGAGGCA CGGGTACCCA
GAGGTCAGGT TCAGCGTCGG CGTCCCGTCC ATCGAGGGAG ACCCCGCGCT GTTCGAGGAC
CAGGAGCGGT GGCTCTCGAT GCCCCTACGC GACGTGATAG GCATGAGGCT CGGGATAGTA
AGGGGCGAGG TACGGGTCAA GGTCGACGGT CGGGGGCTCT CGGACGAGGT TAGGCTTGCC
GCTCTCTCCT CTAGGCCCGT CGACGTCGAG ATCCTACTGG AGAAAGCCCC CAGGGCGAGG
CCACTGGTAG ACCTCTTCTC CCCTCCCCTG GGGCCCGCCG GCCCGGCTGC GAAGATAAGC
GTGCTGGGTA ACCCGAGCGT GCCCAGGAGC CTGGAGAAAG CCTACTACGA CTACGACCTG
GGCGCCCGCG AGGCTATATA TGCACTCTAC AGGGAGGGCG TGCCGGTACA CTACATCCAG
AGGGCTCTAT CCGTGGGGGC TCTGGGGCTG GGAGGGCGTA GGAGGATCGT CCCGACTAGG
TGGGCTATAA CAGCCGTGGA CTCGACGCTG TCGCAGGAGC TGATCGAAGA GGTTAAGAGG
CTGGACTACT TCGACGAGTA CCTGTTCTTC GAGAGAAAGT TCTCGGATAA CACGTTCGTG
GCGATAATAG CGCCCGGCGC GTGGAGCTAC GAGTGGATAG AGGCGTGGTT CCCGCACACG
ACGTGGAACC CCTCGGCGAG GCTCGAGGTC GAGGGGGACT GGGAGGGGTT CAAGGGTAGA
ACCACGTACG CCTCGCTGGG AGGCTGCTAC TACGCCGCCA GGCTTGCAAC CGCGGAGTTC
ATGCTCCGGG AGAAGAGGCA GGGAACGGCG ATACTCCTCC GCGAGATATA CGAGGGCTTC
TTCCTGCCGA TAGGGGTCTG GTTCGTACGG GAAAACGTGA GGGAGCTCTT CAGGTCCAAG
CCGGAGAGGT ACGAAAGCCT CGAAGAGGTG CTACGCAGGT TGGAGAAGTC TACGAGGCTA
CCCCTGGGCA CGTGGCTCGC CGCGTCAACC CTCCTGAGGA GGCTTTTGAG GCAGAGTAGC
ATCGAGGCGT ACATATGGAG GGGGTAG
|
|---|
| Protein sequence | MGERAAATCL QCRGAKRLCG KSSCPVLDLW LALERVRVPE TREIDGYSPP TVFVGRHGYP
EVRFSVGVPS IEGDPALFED QERWLSMPLR DVIGMRLGIV RGEVRVKVDG RGLSDEVRLA
ALSSRPVDVE ILLEKAPRAR PLVDLFSPPL GPAGPAAKIS VLGNPSVPRS LEKAYYDYDL
GAREAIYALY REGVPVHYIQ RALSVGALGL GGRRRIVPTR WAITAVDSTL SQELIEEVKR
LDYFDEYLFF ERKFSDNTFV AIIAPGAWSY EWIEAWFPHT TWNPSARLEV EGDWEGFKGR
TTYASLGGCY YAARLATAEF MLREKRQGTA ILLREIYEGF FLPIGVWFVR ENVRELFRSK
PERYESLEEV LRRLEKSTRL PLGTWLAAST LLRRLLRQSS IEAYIWRG
|
|---|
| |