| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1680 |
|---|
| Symbol | |
|---|
| ID | 4600932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1627223 |
|---|
| End bp | 1628197 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639774453 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_921078 |
|---|
| Protein GI | 119720583 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAAC TGTTAAGACT AGAGAACGTG ACTAAGGAAT ACTCCAGAGG ACTCTTCGGT
GGAACGAGGT TCAGAGCCGT AGAGGATGTC AGCTTTAAGG TCGATAAAGG AAAGATATTG
GCGTTGATAG GCGAGAGCGG AAGTGGCAAG ACAACAATAG CCAGGATAAT CCTAAGGATC
CTAAGGCCTA CTAGCGGAAG AGTTATTTTC GAGGGGAAGG ATATCTTTGC CTTCGATGCC
GAGGAATCTG CGGCTTACTA CAGAAACGTT CAAGGAATAT TTCAGGACCC CTACTCCAGC
TTTAACCCCC TGAAAACGGT GGACGATATC CTAGAGCTAA CGTGTAAAAA GTATACGTGC
TCGGAGTACC CAGAAAACGC GATTAAACAA GTACTTGAAA GAGTGGGGCT TGATCCGCAA
AGCGTTCTTG GAAAGTTCCC TCACCAGCTC AGTGGCGGAC AGTTGCAGAG AGTCTCCATA
GCGAGAGCTC TATTGGTGAA ACCTAGACTA CTAGTGGCAG ACGAGCCCGT ATCAATGCTG
GATGCCTCAA CGAGGGTGGA CATATTAAAT ATCCTCTACG ATCTAAAGAC CGGTGAAAAC
ATCTCGACGT TGCTCATAAC GCATGACGTT TCTCAAGCGT ACTACGTCGG AGACGAGATA
GTTGTATTGT ATAGGGGACA CGTCATGGAA AGAGGGGACG CCACAATATT GGAAAAACCC
CTTCACCCAT ACACGACGAA CCTTCTAGCA TCCGTACCAA CACTTAGCTC CAGGTGGGCG
ACCGAGGAAA AGATTCGGGC AGCGAGGCTA AGGCTCGAAG CAGAAGAAGA AACAGTCTAC
ACCACTACTG GATGCAAGTA CGCTTCGAGG TGTCCCTACG CTTCAGAGAA GCTCGGATGC
TTCACAAGGA AGCCACCAGA AATAGAGGTT GAACCCGGAC ATTTCGTGAG GTGCTGGCTT
TATGAAAGAA GGTAA
|
|---|
| Protein sequence | MVELLRLENV TKEYSRGLFG GTRFRAVEDV SFKVDKGKIL ALIGESGSGK TTIARIILRI
LRPTSGRVIF EGKDIFAFDA EESAAYYRNV QGIFQDPYSS FNPLKTVDDI LELTCKKYTC
SEYPENAIKQ VLERVGLDPQ SVLGKFPHQL SGGQLQRVSI ARALLVKPRL LVADEPVSML
DASTRVDILN ILYDLKTGEN ISTLLITHDV SQAYYVGDEI VVLYRGHVME RGDATILEKP
LHPYTTNLLA SVPTLSSRWA TEEKIRAARL RLEAEEETVY TTTGCKYASR CPYASEKLGC
FTRKPPEIEV EPGHFVRCWL YERR
|
|---|
| |