Gene Tpen_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1635 
Symbol 
ID4600914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp1581772 
End bp1582719 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content64% 
IMG OID639774408 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_921033 
Protein GI119720538 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.861847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTCC TCGAAGTCAG GGACCTCGTC GTGAAGTACG CTACGAGGCA GGGCGAGGTC 
GAGGCGCTCG GCGGGGTAAC GCTCTCCGTG AACCCGGGGG AGGTGCTGGG CGTGGTCGGC 
GAGAGCGGGT CCGGGAAGAG CACGCTGGGG CTAGCGATCC TGAGGCTACT GCCCAGGTAC 
GCCAGGGTCG AGAGGGGGCA AGTGCTCTAC AACGGCGCCG ACCTCCTGAA GCTGGGGGAG 
GAGGAGCTCA GGAGGATAAG GGGGAGGGAG ATCTCGATAG TGTTCCAGGA CCCCTACTCC 
TCCCTTAACC CCGTGATGCG GATAGGGGAC CACTTCGTGG AGCTATTCGA GGAGCACGGC 
TACGGGTACT CCAGGGAGGA GGCCCTGCGC AGGGCGGGGG ACATCCTCGA GAGGATGGGC 
GTCCCGAGGG AGAGGCTCTC CGACTACCCC CACCAGCTGA GCGGGGGGCA GAGGCAGAGA 
GTAGCGATAG GGCTCGCACT GGCGCTGAAC CCCAAGCTGG TAGTAGCGGA CGAGATAACG 
ACCGCGCTGG ACGCCCTCGT GGAGGCCCAG ATAATGGACC TACTGAGGGA GGTCAAGAAG 
GAGTACGACA CGTCCATACT CTTCATAACG CACAACATGG GGCTAGTCGC CGAGCTTGCC 
GACAGGGTGG CGGTCATGTA CGCCGGGAAG CTCGTCGAGC TGGGAAGCAC GGGCGAGGTC 
GTGGGGGACC CCCTCCACCC GTACACAAAG GCTTTGCTGG CGGCTGTGCC GAGCATAGGC 
GGATCGAGGG AGGTTAAGCC GATACCCGGG GACCCTCCCG ACATGAGGAA CCCCCCGAGG 
GGCTGCAGGT TCCACCCGAG GTGCCCCTTC GCGACCGAGA AGTGTAGAGC AGAGGAACCG 
GTTCCAAGGG ATAGGGGTGG TAGGATTGTC GCATGCCACT ACGCGTGA
 
Protein sequence
MSLLEVRDLV VKYATRQGEV EALGGVTLSV NPGEVLGVVG ESGSGKSTLG LAILRLLPRY 
ARVERGQVLY NGADLLKLGE EELRRIRGRE ISIVFQDPYS SLNPVMRIGD HFVELFEEHG 
YGYSREEALR RAGDILERMG VPRERLSDYP HQLSGGQRQR VAIGLALALN PKLVVADEIT 
TALDALVEAQ IMDLLREVKK EYDTSILFIT HNMGLVAELA DRVAVMYAGK LVELGSTGEV 
VGDPLHPYTK ALLAAVPSIG GSREVKPIPG DPPDMRNPPR GCRFHPRCPF ATEKCRAEEP 
VPRDRGGRIV ACHYA