| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1615 |
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| Symbol | |
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| ID | 4601907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1559975 |
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| End bp | 1561210 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639774388 |
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| Product | hydrogenase formation HypD protein |
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| Protein accession | YP_921013 |
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| Protein GI | 119720518 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0464734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGGTC AGGGGCTCGC TTTTCTGGAG AAGCTTGGCT ACTTGGAGAA GGCTTTCAGG
TCTAACGCTA GGCTTGCCGG GGCGCTTAGG GGGTATATTG CCAGGAAGTT CGAGGAGATA
AGGGCTAGGG AGGGGCGGGA CTACAGGATC AAGATCATGG ACTTCTGCGG GACTCACGAG
TGGACTATCG TGCACTTCGG GCTTAGGAGC CTCATGCCGG AGGGGGTCGA GCTGGTGGCT
GGGCCCGGGT GCCCTGTCTG CGTCACTCCT TCCTGGTACA TCGAGAGGGC TATAGAGCTC
TCCCTGAGCG GGGTGACCGT TTACACGTAC GGGGATACCT TCAAGCTCCG CGCGGTGAAC
CCCGTGGACG GCGTCTCGTC CCTCGAGGAG GCTAGGGCGG CGGGGGGTAG GGTGAGGCTC
GTGGTGAGCT TAGTGGACGC CGTGAGGGAC GCCTCTAGGC ATGGGGGCGA GTCGGTCTTT
CTCGGTATAG GCTTCGAGAC CGTTGCCCCC GGCTACGCCC GCGCGGTCGT CTCGGGGAGC
CTCCCGGAGA ACCTCAAGCT CATGAGCCTC GTTAAGCTCA CGCCTCCAGC CATGTTCTAC
TCCTTGGACA TCCTGCGCGA CAAGCCCACG GAGCCGCCTG TCATGGGGGT GATAGCGCCG
GGCCACGTGT CGACGGTTAC CGGGGCGAAG GCGTGGGAGC CCGTCGCGGA GCAGTTCCAG
GTGCCCGTGG TCGTGTCGGG GTTCGAGCCT ATAGACGTGC TCATGGGTAT CGCGGAGATC
ATGCGGCAAC TGGCGAGGGG GGAGTACGGG GTCAAAGTGG AGTATACGCG GGCGGTGACG
TGGGAGGGGG ACCTGGAGGC GCAGGCGGCT ATACACGAGG CGTTTGAAGC TGTGGACGAC
GCGTGGAGGG GGATAGGGTT CCTGCCGCTC AGCGGGCTTA GGCTCAGGGA GAAGTACGGG
CGCCTGGACG CCTTGAGGCA CTTCGGGATC GAGGAGCTGA CGCCCGAGAA GTGGCGGAAG
GACACTCCTC CCGGCTGTAG GTGCGCCGAG GTGACGCTCG GGAAGGCTAA GCCCACGGAC
TGCCCCATGT TCATGAAGAA GTGTACCCCC GAGAAGCCGT ACGGGCCCTG CATGGTTTCC
CTCGAGGGGA CGTGCGCCGT CTGGGCTAGG TTCGGAGGGG GAGGGCTGGC GGACCAGATA
GCTCGAGACC TAGCGCTGGA AGCCGGGCTG GGATAG
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| Protein sequence | MEGQGLAFLE KLGYLEKAFR SNARLAGALR GYIARKFEEI RAREGRDYRI KIMDFCGTHE
WTIVHFGLRS LMPEGVELVA GPGCPVCVTP SWYIERAIEL SLSGVTVYTY GDTFKLRAVN
PVDGVSSLEE ARAAGGRVRL VVSLVDAVRD ASRHGGESVF LGIGFETVAP GYARAVVSGS
LPENLKLMSL VKLTPPAMFY SLDILRDKPT EPPVMGVIAP GHVSTVTGAK AWEPVAEQFQ
VPVVVSGFEP IDVLMGIAEI MRQLARGEYG VKVEYTRAVT WEGDLEAQAA IHEAFEAVDD
AWRGIGFLPL SGLRLREKYG RLDALRHFGI EELTPEKWRK DTPPGCRCAE VTLGKAKPTD
CPMFMKKCTP EKPYGPCMVS LEGTCAVWAR FGGGGLADQI ARDLALEAGL G
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