Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1612 |
Symbol | |
ID | 4601904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1557996 |
End bp | 1558541 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639774385 |
Product | hypothetical protein |
Protein accession | YP_921010 |
Protein GI | 119720515 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.103859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTTA AGCTCGGCGA GGTAACGCTG CTACTTGGGG AGGGGGTCTC CGTCGGGATA CTCTTCGGCG GGAAATCCAT AGGCGTCAAC GCGGGCGGAG GCTACGCGTA CCTCTTCTAC ACCCGCTGCG GCTACGAGCC ACAAGGCATC GGCGGCGATT TCTACTCCCC CTGCGGGGGA CGCGTCGTGA AGCCTGGAGA CGCCCTGGAG CTGGAGGGCT TCAGGGTTAG GGTCGTCAGC GGCTACAGGC GCGCGGAGCA AGGGGGAGGC GTCGGCTACG TGTTCTACCT AGGCGGGGTC AAGGTCTACT ATGCCGGCCC GACGGGGCTA GTCGAGGAGA TAGTAGGCCT CAGGGGCGAG GATATCGACG TCGCCCTCCT ACCCCTCGGC GAGGGGGCCA TGACGCCCGA GGAGGCATCC GAGGTCGTGA GGACGGTGAG GCCTAGGGTA GCGGTCCCCC TGAGGGCGGG GCCCGAGAGG TGGCTGTACA GGTTCCGCGA CCTCTCACTC GTTTACACGC AGGTAGTCGT ACCGGGGAGG AGGTGA
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Protein sequence | MRLKLGEVTL LLGEGVSVGI LFGGKSIGVN AGGGYAYLFY TRCGYEPQGI GGDFYSPCGG RVVKPGDALE LEGFRVRVVS GYRRAEQGGG VGYVFYLGGV KVYYAGPTGL VEEIVGLRGE DIDVALLPLG EGAMTPEEAS EVVRTVRPRV AVPLRAGPER WLYRFRDLSL VYTQVVVPGR R
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