Gene Tpen_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1612 
Symbol 
ID4601904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1557996 
End bp1558541 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID639774385 
Producthypothetical protein 
Protein accessionYP_921010 
Protein GI119720515 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.103859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTA AGCTCGGCGA GGTAACGCTG CTACTTGGGG AGGGGGTCTC CGTCGGGATA 
CTCTTCGGCG GGAAATCCAT AGGCGTCAAC GCGGGCGGAG GCTACGCGTA CCTCTTCTAC
ACCCGCTGCG GCTACGAGCC ACAAGGCATC GGCGGCGATT TCTACTCCCC CTGCGGGGGA
CGCGTCGTGA AGCCTGGAGA CGCCCTGGAG CTGGAGGGCT TCAGGGTTAG GGTCGTCAGC
GGCTACAGGC GCGCGGAGCA AGGGGGAGGC GTCGGCTACG TGTTCTACCT AGGCGGGGTC
AAGGTCTACT ATGCCGGCCC GACGGGGCTA GTCGAGGAGA TAGTAGGCCT CAGGGGCGAG
GATATCGACG TCGCCCTCCT ACCCCTCGGC GAGGGGGCCA TGACGCCCGA GGAGGCATCC
GAGGTCGTGA GGACGGTGAG GCCTAGGGTA GCGGTCCCCC TGAGGGCGGG GCCCGAGAGG
TGGCTGTACA GGTTCCGCGA CCTCTCACTC GTTTACACGC AGGTAGTCGT ACCGGGGAGG
AGGTGA
 
Protein sequence
MRLKLGEVTL LLGEGVSVGI LFGGKSIGVN AGGGYAYLFY TRCGYEPQGI GGDFYSPCGG 
RVVKPGDALE LEGFRVRVVS GYRRAEQGGG VGYVFYLGGV KVYYAGPTGL VEEIVGLRGE
DIDVALLPLG EGAMTPEEAS EVVRTVRPRV AVPLRAGPER WLYRFRDLSL VYTQVVVPGR
R