| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1605 |
|---|
| Symbol | |
|---|
| ID | 4601536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 1552983 |
|---|
| End bp | 1554131 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639774378 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_921003 |
|---|
| Protein GI | 119720508 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.119603 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGC GTTTCCGCGG AGACGAGCAC TTGAGGAGAG TGCTCGAAGT AGCTTCGAGG
ATTCTTAGGG AGGGCCGCGT TAAGTGCTTG TCCGGGAGGC CCGAGGACGC CCTAGTGGAG
GAGGCCCTCG CTATGCTCGG GTGCAGGGTT CCGCGGTGCG GAGAGGCGCC CGCGGAGTGT
AGCCTGGAGG AGCTCGGCTT CTACGAAGAC GTGTCGCCGT CCACCCTTAG GGTTTTCAAC
AGCACCGAGG AGCTCCTCTA CAAGAACTGG CCCACGCCCC TCGTGAGGCT CAACTCTCTG
GGCGACGGGA AGGTGCGCGC CTGGGCTAAG CTCGAGTTCT TCAACCCGTT CAGCATGAGC
GTTAAGGACA GGATTGGCTG GTACATGGTG AAGAAGCTCC TCGAAAAGCA TCCCGGCGCG
AGCCTCGCGC TCTACGAGGC GACGAGCACG AACACGGGGA TGGCGCTCGC TGCGATGGGC
GCAATTAAAG GGTTCAGGGT GAAGCTCTTC CTCCCGGAGA CTATCCAAAA GGCTTCCGAC
ACTCTGCTGT CAGTCATGGG GGCAGAAGTG CGCAGAGTGC CGAAAAGCCT CACAGTCGAG
TTTATAGACG ACGTGGAGCA CCTAGCGAAA GAGGAGGGCG GGGTACACCT AAACCAGTTC
GAAAACGACG CGAACTTCGG GGTACACCTG AGGTACACGG CCAAGGAGCT AGACCTCCAG
GTTAGAAGCG CAAAGCTAAA TCTGCGCGGC ATCGTAGGGG GGCTGGGGAC CTCCGGGCAC
CTCTCAGCGC TCTCGCTGTA CTTTAAGAGC AGGTACAGCG ACGTGAAGAT ATACGGCGTT
CAACCCGCCC CCGGCACCGT GATCCCCGGG ATCAGGAGGG TGGAGACGGG TATGAAGTGG
GTTCACTACG TATCCGTGGA CAAGGTGGTC GACGTAACCC CGGAGGAGGC GGTCGCCCAC
GCCGTGAAGG TGGCGAGGAG GGAGGGGATA CTGGTGGGGC TCAGTAGCGG AGCGGTAACG
GCGGCGTTCG AGGCTCTCTA CAGCGGCGGC GAGCTACCCG AGGGCGACTA CGTACTCGTA
TACCCCGACC ACGGCTTCAA GTACGTAGAG CAGTTCTCCA AGTACCTTCC AATAATCCAC
CAGCGCTGA
|
|---|
| Protein sequence | MDARFRGDEH LRRVLEVASR ILREGRVKCL SGRPEDALVE EALAMLGCRV PRCGEAPAEC
SLEELGFYED VSPSTLRVFN STEELLYKNW PTPLVRLNSL GDGKVRAWAK LEFFNPFSMS
VKDRIGWYMV KKLLEKHPGA SLALYEATST NTGMALAAMG AIKGFRVKLF LPETIQKASD
TLLSVMGAEV RRVPKSLTVE FIDDVEHLAK EEGGVHLNQF ENDANFGVHL RYTAKELDLQ
VRSAKLNLRG IVGGLGTSGH LSALSLYFKS RYSDVKIYGV QPAPGTVIPG IRRVETGMKW
VHYVSVDKVV DVTPEEAVAH AVKVARREGI LVGLSSGAVT AAFEALYSGG ELPEGDYVLV
YPDHGFKYVE QFSKYLPIIH QR
|
|---|
| |