| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1576 |
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| Symbol | |
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| ID | 4600562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1528285 |
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| End bp | 1529568 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639774349 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_920974 |
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| Protein GI | 119720479 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0597639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCAA CGCAATCTCA GCAAAAGGGA AAATTCGCCT TTGACGTAAA GCTCGTAGCA
GTCGCGATAA TCGCCCTCAT AGTCGGAGTA GCCATAGGCG CGGCGATCTT CGGAGGAGCG
GCGGGGCAGG CCCCCGGCGC GGCGCAACAG GCTCCCAAGA AAGTCTACAC TATAGGCTTC
ACGCTCCCGC TGACCGGCGA GCTCTCGTCC ATCGGGAAAA TTTGGGAAAA AGTGGTCTAC
CTGGCAATAG ACGACCTGAA CAAGGAGGCG CAGGCTTACG GGTTTAACGT AGAGTTCAAG
GCCGTGATAC TCGACGACGG GACTACGCCC GAGAAGGCCC TCCAAAACGT CCAGACGCTC
GCACAGCAAG GAATAAAGGT CATAATAGGA CCCGCCGCAA GCTCGCAGGT TAAGGCCGTG
AAAGGATTCG TCGATAGCAA CCAGATAGTC TTAATCTCGC CGTCCTCCAC TGCTCCCACG
CTCGCAATAC CCGGCGACTT CATCTTCAGA ACCGTCGGGT CCGACGCCGG GCAGGCAAGA
GTGCTCGCAA CGCTCGCCTA TCAGGAGGGC GCCAGGAAGG TCATAGTGTT CCACAGGAAC
GACGAGTACG GTAACGCGTT CGCGGACTTC TTCAAGAAGT ACTTCTCCGA GCTTGGCGGA
AGCTCCATTG ACGTTCCCTA CCAGACCGGC CTCTCCGACT ACGCCGCAGA GGTCGCCAGC
CTCGCCAGTA AGGTGCAGTC CGAGAAAGTA GACGCCGTCG TGCTGATATC GTTCGACACG
GACGGCGGCA ACATACTGTC GCACGCCGCC GAGTCGCCAG TCCTCTCCAG CGTGAGGTGG
TTCGTCTCCG AGGGTCCCCA CGGAGCCGCA GAGCTCAAAG CCCCGGCTGT CGGGGCTTTC
GCCGCTAAGA CGAAGTTGCT GGGGACACGC CCACTCTTCA TAGGCAACCC GCTCTACGAG
GACTTCAAGA AGAGACTTAA GGAGAAGTAC GGGGTGGACG CCTCCGTGTT CTGCGATACG
CTCTACGATG CAGTTATGCT CGCGGGCTGG GCTATGCTGA GGGCTGGTAG TAGCGATGGC
AACGCTATAC GGAGCGCGCT GATCGAAGTC GCGAAGCACT ACTACGGAGT GAGCGGCTGG
GCAATATTCG ACGAGGCGGG CGACAAAGCG TACCAGGACT ACGGAGTATG GGCGATAGTC
AAGACCGACG GGGGCTACGA CTTCAAAGAC GTAGGGGTAT ACGAGAGAGG CTCCATAGTG
TTTACGGCTA AACCGTACCC GTAA
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| Protein sequence | MSATQSQQKG KFAFDVKLVA VAIIALIVGV AIGAAIFGGA AGQAPGAAQQ APKKVYTIGF
TLPLTGELSS IGKIWEKVVY LAIDDLNKEA QAYGFNVEFK AVILDDGTTP EKALQNVQTL
AQQGIKVIIG PAASSQVKAV KGFVDSNQIV LISPSSTAPT LAIPGDFIFR TVGSDAGQAR
VLATLAYQEG ARKVIVFHRN DEYGNAFADF FKKYFSELGG SSIDVPYQTG LSDYAAEVAS
LASKVQSEKV DAVVLISFDT DGGNILSHAA ESPVLSSVRW FVSEGPHGAA ELKAPAVGAF
AAKTKLLGTR PLFIGNPLYE DFKKRLKEKY GVDASVFCDT LYDAVMLAGW AMLRAGSSDG
NAIRSALIEV AKHYYGVSGW AIFDEAGDKA YQDYGVWAIV KTDGGYDFKD VGVYERGSIV
FTAKPYP
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