Gene Tpen_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1540 
Symbol 
ID4600833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1488388 
End bp1488900 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID639774314 
Producthypothetical protein 
Protein accessionYP_920939 
Protein GI119720444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTCA CGCCGTTTCA CCTGGGGCCT GCTCTCGCCG TGGGGCTTCC GCTCAGGGAG 
AGGATCCACG CCCCCACGTT CATACTGGCC AGCATCGCGG TGGACGTCGA GCCGCTAGTA
GTGCTCGTGC TGGGGCTCGA CTACCCCCTC CACGGCTACC TCCACACGTT CGCCGGCGCC
GCGTTGCTGG GGCTGTGCCT AGGGCTCCTG ATGCACGCGA CGGAGAAGGT ACTCGGGAAC
GCCTGGAAGA GAGCCCTGCT GGAAGGGTCG CGGAGCGTTG GCTTCGAGGG CTTCGCGGTG
GCCGGGATCC TAGGGTGCAC GGTTCACGTT CTGCTCGACT CGCCGCTGTA CCCCGACATC
AGGCCGCTCT ACCCCTACGC CGCGAACCCT CTCTACGACC CCAGTTTAAC CCCGGCCGTC
TACCTGCTCT GCTCCGTGCT CCTCCTGGGA GGGCTGGCGT ACTACCTATA CCTCGCCCTG
CAGCATCAGG CGAAGCAAGG GTTAGCCCGC TAG
 
Protein sequence
MPFTPFHLGP ALAVGLPLRE RIHAPTFILA SIAVDVEPLV VLVLGLDYPL HGYLHTFAGA 
ALLGLCLGLL MHATEKVLGN AWKRALLEGS RSVGFEGFAV AGILGCTVHV LLDSPLYPDI
RPLYPYAANP LYDPSLTPAV YLLCSVLLLG GLAYYLYLAL QHQAKQGLAR