Gene Tpen_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1538 
Symbol 
ID4600380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1485857 
End bp1486918 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content59% 
IMG OID639774312 
Producthypothetical protein 
Protein accessionYP_920937 
Protein GI119720442 
COG category[S] Function unknown 
COG ID[COG3367] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGAGG GAGAAGCGGT AATACTGGCG GAGGGTCTCT ACTCGACGAC TGACGGCAAG 
ACGGCGCACG GGCTCGTCAG GAAGAGCCTA CGCTACAAGA TAGTCGGGGT GATAGACAGC
ACCCTCGCTG GGAGGGATGC AGGCGAAGTG CTCGACGGGA AACCTCGCGG CATAAAGATA
TACTCCTCCC TCGAGGAGGC GTTGAAGGAG CACCCCGGGG TAAAGTTCCT CATAATCGGC
GTGGCGACTC CTGGTGGCAG GCTCCCGCCG TCCTACAGGG AGGTGGTGAA GGAGGCGTTG
AAGAGGGGGA TAAGCGTGGT TTCTGGTTTA CACGAGTTTC TCAGTGACGA CCCGGAGCTC
TCTAGGATAG CCAGGGAGAC TGGCGCCGAA ATAATAGACG TGAGGAAGAT ATACTACAAC
ACCAGGAAGT TCTACACAGG GAAGATAAAG GAGGTCAAAG CCCTCAAAGT GGTCGTGATA
GGGACGGACT CGGCTGTCGG CAAGAGGACG GTTGCCCACA TGGTGACCGA CGAGCTCAAC
GCGAGGGGAA TTAAAGCCGT CTTCGTCGGT ACGGGGCAGA CTGCCTGGAT GCAGGGCGCC
AAGTACGTCT TCGTGCTTGA CAGCGTGATA AACGACTTCG TCCCCGGAGT ACTGGAGGAC
GTCGTGTGGA GGGCGTACAG CGAGGAGAAG CCCAAGGTCA TAGTCGTGCC GGGTCAGGGT
AGCCTGCTTC ACCCGGTGTT CCCGGGGAGC TACGAGATAC TGAACCTGTT GAAACCCGAG
GTCACCATCC TGCACCACGC GCCAGGTAGG AAGCACTTGG ACGGGTTCCC CGAGTACCCG
GTTCCACCCC TGGAGAAGTT CCTGAAGCTC GTCGAGATAA TAACCGATAG GAGGGTCTTC
GCGATCACTC TCAGCACCGA GGGGCTCTCG GAGCGGGAGG TGCTCGCCGA GAGGGAGAAG
CTTGAGAAGG AGCTCGGGAT CCCCGTCGTG GTCCCGATGA TCGAGGGCGT CGGGAGGATT
GTCGACGAGA TAACCAGGAG GTTCCCGGAA GTGGTGGGCT AA
 
Protein sequence
MEEGEAVILA EGLYSTTDGK TAHGLVRKSL RYKIVGVIDS TLAGRDAGEV LDGKPRGIKI 
YSSLEEALKE HPGVKFLIIG VATPGGRLPP SYREVVKEAL KRGISVVSGL HEFLSDDPEL
SRIARETGAE IIDVRKIYYN TRKFYTGKIK EVKALKVVVI GTDSAVGKRT VAHMVTDELN
ARGIKAVFVG TGQTAWMQGA KYVFVLDSVI NDFVPGVLED VVWRAYSEEK PKVIVVPGQG
SLLHPVFPGS YEILNLLKPE VTILHHAPGR KHLDGFPEYP VPPLEKFLKL VEIITDRRVF
AITLSTEGLS EREVLAEREK LEKELGIPVV VPMIEGVGRI VDEITRRFPE VVG