Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1448 |
Symbol | |
ID | 4601157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 1399595 |
End bp | 1399948 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639774223 |
Product | hypothetical protein |
Protein accession | YP_920848 |
Protein GI | 119720353 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5550] Predicted aspartyl protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.499553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCACG TATACGCGCC CGTAAAGCTT TACCACGGAG AAAAGTCGCT TGAAGTAAAG GCTCTCGTGG ACACCGGCGC AACGACACTG GTTCTGCCCA GAAGCGTCGC AGAGGAGCTT GGCTTGCGCG TGCTGGGGAA GATGGATGTC GAGCTGGCGG ATGGGACTGT TAAAAAGGTT GATTACAGCA TCGTTGAGGT TGAGCTGAGC GGTAGGAGGG CTCCCGTCTT GGTAGCTATC GTCGAGAGAG GGGAGGTTTG CGTGGGAGTG GAGGCGTTGG AGAGACTAGG GCTTGCGGTT GACCCGGCTA CTGGGAGTAT TTACTCGACG AGGAGGTTTG TAACTAGGCT GTAA
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Protein sequence | MGHVYAPVKL YHGEKSLEVK ALVDTGATTL VLPRSVAEEL GLRVLGKMDV ELADGTVKKV DYSIVEVELS GRRAPVLVAI VERGEVCVGV EALERLGLAV DPATGSIYST RRFVTRL
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