Gene Tpen_1439 details

Gene Information

• Locus tag: Tpen_1439
• ID: 4601369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1390378
• End bp: 1391094
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639774214
• Product: hypothetical protein
• Protein accession: YP_920839
• Protein GI: 119720344

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.157586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGCG CCCTCCCAAG CGTGGTTACG CCGCAGGAAG TCGGCTGGAC TATCGCCCTC 
TTCGCCTGGG TAATGTTCGT AGTGCTCGTC GTGGCTAAGG CTACCTACAA CTTCTTCGTT 
AAGAGGAGCA ACGAGCGCGT CGCTATCTAC TACGCCAGGA AGGTTATACA CATCCTCGCC 
GGGGGGCTTG TCGCGGCGGT TATCGCGTAC TTCCCGATAT TCTCGACCCC CGTACTGCCG 
TTCGCGATGG CGATGGTGCT GGCTCTCCTA ACTTACCTGC CTCACAGGAC GGGCAAGCTG 
ATGTACTGGT TCCAGGACCC CGAGAACATC TACGAGGTGG ACTTCTGCTT GATGTGGGGC 
GTGTTCGTCG TTCTCGGCTG GTTCGTCGGG AGGGACCTTA AGCTGGCCAA CCCGTTCCTG 
TTCCCAGCGC TCCCCCTGCT CTTCATGGCT GTCGGCGACG GGGTTACGGG GATAGTTAGG 
AACGCTCTCT TCAAGAGGAG GGTTAAGCAC TGGAGCGGGA ACCTCGCGAT GTTCATAGTG 
TCCGCCGCCA TGGCTGTCGC CATGGGGTTC GGCGTCCCGG GAGTACTGTC CGCCGCCCTC 
GCCAGCCTGG TGGAGAGGTG GGAGTACATC GGAAAGCTGA GGATAGACGA CAACGTCTCC 
GTGCCGACGG TCTCCTTCGC CGCCCTCTAC CTGCTCACGC GGTACGTGCC GGTCTAG 

 

Protein sequence

MKSALPSVVT PQEVGWTIAL FAWVMFVVLV VAKATYNFFV KRSNERVAIY YARKVIHILA 
GGLVAAVIAY FPIFSTPVLP FAMAMVLALL TYLPHRTGKL MYWFQDPENI YEVDFCLMWG 
VFVVLGWFVG RDLKLANPFL FPALPLLFMA VGDGVTGIVR NALFKRRVKH WSGNLAMFIV 
SAAMAVAMGF GVPGVLSAAL ASLVERWEYI GKLRIDDNVS VPTVSFAALY LLTRYVPV