Gene Tpen_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1436 
Symbol 
ID4601366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1388042 
End bp1388443 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content58% 
IMG OID639774211 
Producthypothetical protein 
Protein accessionYP_920836 
Protein GI119720341 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0608758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGGA GGTTCCTCCT GGACGCCTCG TCGGTCGTGC AGGCCTTGAA GCTCGGGAAC 
TTGAGGGTAA TCTACGGGAA CTACATCCAG TGGCTTACCG TATACGAGGT TGTTAACGCG
CTTTGGAAGG AGGCCCTGCT GGCCGGTAGT ATAAGCGTCG AGGAGGCCTC CAACCTGGTC
GAGGTGTTCG CCGAGACCGT TAAGCTCGTA GAGGTGCTGA GCCCCCACCC GTACGAGGCG
GAGATACTGG AGACAGCCGC CAAGCTGGGG TTAACGGCTT ACGACGCGTC CTACGTGGTG
CTAGCGATAA GGAACGGTTT ATCCCTGGTG ACCGAGGACA GGGTGCTGAG GGAGAAGGCG
AAAGGCGTAG TTAAAGCTGT GAGCCTAAGG GAAGTACTCT AG
 
Protein sequence
MERRFLLDAS SVVQALKLGN LRVIYGNYIQ WLTVYEVVNA LWKEALLAGS ISVEEASNLV 
EVFAETVKLV EVLSPHPYEA EILETAAKLG LTAYDASYVV LAIRNGLSLV TEDRVLREKA
KGVVKAVSLR EVL