Gene Tpen_1418 details

Gene Information

• Locus tag: Tpen_1418
• ID: 4600735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1371051
• End bp: 1371746
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 639774193
• Product: hypothetical protein
• Protein accession: YP_920818
• Protein GI: 119720323

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.953506
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCTCC TCGGGGTTTT GCTCGTCGCC GCGGTGCTCC TAGCCCCGCT GGCGTGGGGC 
CAGCCTACGC TGAGGATAGT CGCGTACGAC GGCACGAGCC TTGCTGGGGC GCTGGTCAGG 
GTGTCGACGC TCGACGGCAG GGTGTACGAG TTCACGCTTA ACCCGGCCGC GCCCTTCACC 
GTCAAGGACG TCGTTAAGGG AGTCCTGCGG GTGGAGGTGG TCTCCTGGAA GGGGGTGCCC 
GTCAACTACG AGAAGACCGT GACCGTATAC GAGAACTCAA CGCTCGTCGT CCCGAGCATA 
GGCAGGCTGA CGGTCGCCGT TAAGGGTGCG AGGGGGCAGG CGCTCCCCGG CGCCCTCGTA 
ACCATCTCGC GGGGAGGCGT TACCGTCGAG GAGGGGTCCG CGGGCTCCTC GGGTATCTAC 
AGCACCCTTC TACCGGCCGG TACCTACGAG GTAGCCGTTG CGTACGGGGG GCGCTCGGCG 
CGCGTAGAGG CTGTCGTGGA GCCCTCTAGG GAGAGCAGGG TCGAAGCCGC GCTCGACGTC 
GTAGCCGAGG TTGGGGGCTG GGCTCTCAGC GCCTCCGAGC TCCTGGGGGT CTCGCTGCTG 
GCGGTTCTAG CTGTCTTCGC GGTGTACGTG GCCCTCTACG AGTACGCTTC CTGGAGGAAG 
AGGAGGGCCG CGAGGGTCGT CGCTCCGGGA GGCTAG 

 

Protein sequence

MRLLGVLLVA AVLLAPLAWG QPTLRIVAYD GTSLAGALVR VSTLDGRVYE FTLNPAAPFT 
VKDVVKGVLR VEVVSWKGVP VNYEKTVTVY ENSTLVVPSI GRLTVAVKGA RGQALPGALV 
TISRGGVTVE EGSAGSSGIY STLLPAGTYE VAVAYGGRSA RVEAVVEPSR ESRVEAALDV 
VAEVGGWALS ASELLGVSLL AVLAVFAVYV ALYEYASWRK RRAARVVAPG G