Gene Tpen_1410 details

Gene Information

• Locus tag: Tpen_1410
• ID: 4601824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1364065
• End bp: 1364787
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 639774185
• Product: formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit)
• Protein accession: YP_920810
• Protein GI: 119720315

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.182514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCGTGG GTAGAAGGGT CGAGATAATA AGCAAGAGCT ACAGGATAGC GCACACCCAC 
AACCTGCACT TCATAGCAAT ACTATCGGTG ACCGGCTTAA CGGTAATGGC GCTTGAATAC 
TTCTCGTGGC TTGCCTACGT AGTCGGGCTT CCCTTCGCCC CGCTACTCGG AGTAGACCCC 
GTCACCGCCG GAGTGCAGAT ATTCCGAGTA TTGCACAGGA TATTCGGCGT AGCGTGGGGA 
GGATTGCTGG TAGTGTACGG GTGCTACCTC TTCTGCTCCG GGAAGGCTAG GGTATTCGAC 
CCCCTAAAGA AGCCCCTGAG GGACCAGCTC AAGGAGGCCT CCTCCCTCGC GAAACACTAC 
CTGCTCGGCA AGCCTATACC CGAGGAGGTA CTAGAGAAAA TGGAGAGACA CAACGTCTTC 
GTGTCCTATC TGGCGATACT CCTCGGAGTA GGCTTCGCGC TCCTAGCTGT GAGCGGCGTC 
GGGCTCATGC TCCGCTACGC CCTAGGCTTA ACGGCCCAGC AAGCCGCGAT ACTACTCTTC 
CTGCACGACC TGGGCTTCGG CATAACGGTT CTCTTCGTGC TGTTCCACCT CTTCGCCGCC 
TTCCACCCGT CCAACAGGCC ACTCCTCGAC GCCATGTTCG GCAATGGCAC AGCGCCCTTC 
GACTGGGTCG CAGAGCACAT GAAGGCTTAC GTAAAGCGCT ACGGCGTAGC CCCCGAGCAG 
TAA 

 

Protein sequence

MGVGRRVEII SKSYRIAHTH NLHFIAILSV TGLTVMALEY FSWLAYVVGL PFAPLLGVDP 
VTAGVQIFRV LHRIFGVAWG GLLVVYGCYL FCSGKARVFD PLKKPLRDQL KEASSLAKHY 
LLGKPIPEEV LEKMERHNVF VSYLAILLGV GFALLAVSGV GLMLRYALGL TAQQAAILLF 
LHDLGFGITV LFVLFHLFAA FHPSNRPLLD AMFGNGTAPF DWVAEHMKAY VKRYGVAPEQ