| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1408 |
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| Symbol | |
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| ID | 4601822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1359691 |
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| End bp | 1363203 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774183 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_920808 |
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| Protein GI | 119720313 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGAG AGATCGATAG GCGTAGCTTT TTGAAGCTGG CAGCCATAGC GGCGTCCGCG
CTAGCTCTAC CGGTCGAAGC GCAACCAATA CCCCTTAAAC CCTGGAAGAC GCAGTGGGGC
TTCGGGGAGA TAGGCGGCAA GGGGGATCTC GCGAAGGCGA GGATAACGCC AGTTATATGC
CCGTACTGCT CGATGGGGTG TTCCATTGAT TTCTACACGT TCGGCGACCA AATCCTGTGG
ACCGAGGGGT CTCCCGACTC CTACATAAAC TTCGGCGCGC TGTGCCCGAA GGGTAAGGCG
GCGTTCGAGC TAGTCGAAAA CGAGATGAGA GTTACGCAAC CGATGATAAG GACGGGTCCG
AAGCCGCCTC CCGAGGAGAT TCTCAGCGCT AAGAGCTGGG ACGAGCTAGT AGCCCTTGTC
AAGAAGTACC CGCCACAGTG GAAGCCTGTA AGCTGGGACG AGGCCTTCAG GTTCATAGCG
AGCAGGGTGG CGAAGATACT CAACGAGTGG CGTAGCTCTA GCGGCGCGCC CAAGCAGCCT
GACGGTTACT ACTACGTCGG CTCGAAGGTT CCCATACAGC TCATAGGCTC GTCCATAATG
GTGAACGAGG CGGGCTACCT TACAACTAAG CTCGCCGAAT TCCTGGGGAC TACGAACGTA
GACTCTCAGT ACAGGAAGTG CCACAGTTCG ACGGTGTCGT CGCTGGCGCT GACCTACGGG
TGGGGCGCGG AGACCGCGAC TATAGAGGAC GTGGCACTCG CCGACGTGGT CCTATTCTTC
TCGAGCCCCG CCGAGGCCCA CCCGCTGTCG TTCCAGTACT TCCTCAAGGG GAAGAAGGAG
AGGGGGACGA TATTCATCAC GTTCGACCCG CGGTACAGCA GAACCGCCAT GGCGTCCGAC
CTGTGGGTTC CCTTCAGGAG CGGTACCGAC ACGGCGATCT TCCTCTACAT CCTCCACTAC
GCCTTCTTCG AGAGGGATCC CCCGATAGAC TCCCTCGACG CGTTCAAGGC TTTAAGGTCG
AGGTGGAACG TAACGGACGA CGACCTGGCA GACTTCAAGG AGCTTATCAA GGAGTACGAC
GCGGAGACCG TCTCCAGGAT TACCGGAGTC CCGGTCGACA TGCTTAGAAC TGTTGCCCGG
ATCTACGTCG AAAACAGCGG TGTGGCGACT AACCACAAGA AGCACGGCGT CGTCCAGTGG
GCTATGGGGA TGACGCAACA CACGAACGCC ACCATAAACA TAATCAGGGC CGCTGCGATA
ATGCAGCTCC TCTTGGGCAA CGTAGGGTTC CCGGGCGGCG GCGCCCACCC GTTCAGGGGG
CATAGCAACG TGCAGGGAGT CACCGACGTC CAGGGAGGAG GGCTGGGCGC CCTCCCAGGG
TACCACGCGT CCCCCTCCTC TACGTTCTAC GTGCGCCTCT ACCAGGATTG GAAGCTCCAG
GGGATGCCGG ACGCCTGGAA CTGGGTCGTC CCCGAGTGGG CGAGGAAGAC CTTTACAACC
ACGACGCCCG ACAAGGGTAG CGCTGACCTC ACGAAGATAC TCCAGGTGTA CACGTTCTAC
GGCTGGAGGA GGTTCGAGCT TCTCTGGGGC TTCTTCTGCG GAACGGTTCC GGAGGACGAC
CCCGTCAACG GGACCGTCGT ATGCGACTTC CCGTTCGGGA CGGGGTCCAC GGAGATAACC
TTCCCGAGGA GAGTCCTCAA CGGCGAGATA AGGGCGGCTT TCATATTCGG GGAGAACCCC
GCGGTGACCA ACCCGAACGC AAAGGTGATA TGGGCGGCTC TCTCGAAGCT CGACCTCCTC
GTAGTGTCGG ACATATTCGA GACTGAGACC GCGTGGTTCG CCGACGTGCT CCTACCGGCG
TCCTCCTTCG CTGAGGTGGA GGGCACGAAG ACGAACGGAA ACAGGGTTAT ACAGTGGACC
TACGCCGCTC TGAACCCCAG GGGCGAGTCT AGGCCCGATT ACTGGATAAT CACCAAGCTA
TTCCAGTACC TGAGGAACTA CGGCGCCGTG AAGCTACCGA GCGAGGTCTT CGGGTTGAAG
AGCGAGAAGG TGAAGGTGAG AAAGGGCGGC AGGGTCGTCC TCCTCTACGA GCGCCCGCTC
AGGCCCGACG CGAGCTGGGA CTACTCTGGA GGCAAGGGCG CCGCGTCGCC GATAAGGAGC
ATCGAGGCAG AGGTCAACCC CAGGATAATA AACAAGGAGA TAAACTTCGC GGTTCTCATC
TACCAGGGGA TGTACGACCC GGTTAGGGAC GAGTTCACCT CGATGCGGAG GGACAAGAGG
CTGAGGCAGC CGGGCGAGAT CGACGGGCTC TTCTCGTCTA CGTTCAAGGT CTACAAGAAC
TGGGGCTGGT CCTGGCCCAT GAACGTCAGG ATACTCTACA GCTACACAGG CCTCGCCGAC
ACTCTCGGCA CGACGGACAC CGTGTACGCG GCTGGGCGTC AGTGGCAGGC CACCGGGGAG
ACCGGGGAAT GGATAGACGA GTACACGGGC GAGTACAGGC CCGCCTTCAT ACCTGGGCAC
AACTTCTGGC TTCCCAGAGC GTTTAAACGC AGGCTAAGCG GGGTTGCCGA CCTCTACGGG
GGGATCGACG TCATGCACCT CATAAGGCAC AACGAGCTGA GGCCTCTGGG GCTCTTCGCT
GTCGAGGACG GCGGCGAGGT AAAGCTGCTC ACGTTCGAGG AGTACGTCGC GAGCACCGGC
ATGAAGTACC TCTGGGCCAA CGATACCCTG TACTGGGATC AGGACACGGC GATAGCCGTG
AAGGCTACCG TGAAGAGGGC CTTCTTCCCG GGCGGCGGTT GGAGGCAGTT CAAGCCCACC
TACGAGCAGA TGAGGGCTAC CCTGAAGAAG TACTACGAGC AGACGGGTAA CATGAGGGAC
GCCGTGAACA AGACGATCCA GGAGCTGAAA GGGTGGTACC CGGGCTACTC CTTCACGTGG
CCTATACACA CGGAGCCCGT CGAAAGCCCC GACCTGGAGA TGGCGATACG GTACCCGACC
CTCGCCTGGC TGAACAGCTA CAACCTCCAG GTACTCAACG AGCAACCCGA CATCGTGAGG
GGCAAGCCCG TCGGGGTTGC GCTTACACCG CAGGACCTAT CGAGCATCCC GGGAGAGCTC
GTGGTTATAA CCACGAACAG GCTCACGGAG CACTGGCACA GCGGGTCAAT GACTAGGAGG
ACTCCGTTGC TGGCAGAGCT GGATCCGGAG CCCTTCGTCT ACGTTCCGAG GGAGCTTGCG
AGGAAGCTGG GCGTGAACTC GGGGGACTAC GTGGAGATAA TCACTGCTAG AGGGTCGATA
AAGATGAGGG CATACGTGAC GGAGGGCGAG GCCTACCTAA CAGTGAACGG CAGGCAGCTA
CCGCATGTAA ACGTTGTGTG GGCGTTCAGC TTCCTCGGGT ACGTGACCGG CCCCCAGGGG
AACTTCATCT CGCCCGACGT AGGTGACGTG GTTACGACGA TCCAGGAGAC TAAGGCTTGG
ATCGGTAAAA TTAGGAAGGC GGAGGTGGTG TAG
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| Protein sequence | MPGEIDRRSF LKLAAIAASA LALPVEAQPI PLKPWKTQWG FGEIGGKGDL AKARITPVIC
PYCSMGCSID FYTFGDQILW TEGSPDSYIN FGALCPKGKA AFELVENEMR VTQPMIRTGP
KPPPEEILSA KSWDELVALV KKYPPQWKPV SWDEAFRFIA SRVAKILNEW RSSSGAPKQP
DGYYYVGSKV PIQLIGSSIM VNEAGYLTTK LAEFLGTTNV DSQYRKCHSS TVSSLALTYG
WGAETATIED VALADVVLFF SSPAEAHPLS FQYFLKGKKE RGTIFITFDP RYSRTAMASD
LWVPFRSGTD TAIFLYILHY AFFERDPPID SLDAFKALRS RWNVTDDDLA DFKELIKEYD
AETVSRITGV PVDMLRTVAR IYVENSGVAT NHKKHGVVQW AMGMTQHTNA TINIIRAAAI
MQLLLGNVGF PGGGAHPFRG HSNVQGVTDV QGGGLGALPG YHASPSSTFY VRLYQDWKLQ
GMPDAWNWVV PEWARKTFTT TTPDKGSADL TKILQVYTFY GWRRFELLWG FFCGTVPEDD
PVNGTVVCDF PFGTGSTEIT FPRRVLNGEI RAAFIFGENP AVTNPNAKVI WAALSKLDLL
VVSDIFETET AWFADVLLPA SSFAEVEGTK TNGNRVIQWT YAALNPRGES RPDYWIITKL
FQYLRNYGAV KLPSEVFGLK SEKVKVRKGG RVVLLYERPL RPDASWDYSG GKGAASPIRS
IEAEVNPRII NKEINFAVLI YQGMYDPVRD EFTSMRRDKR LRQPGEIDGL FSSTFKVYKN
WGWSWPMNVR ILYSYTGLAD TLGTTDTVYA AGRQWQATGE TGEWIDEYTG EYRPAFIPGH
NFWLPRAFKR RLSGVADLYG GIDVMHLIRH NELRPLGLFA VEDGGEVKLL TFEEYVASTG
MKYLWANDTL YWDQDTAIAV KATVKRAFFP GGGWRQFKPT YEQMRATLKK YYEQTGNMRD
AVNKTIQELK GWYPGYSFTW PIHTEPVESP DLEMAIRYPT LAWLNSYNLQ VLNEQPDIVR
GKPVGVALTP QDLSSIPGEL VVITTNRLTE HWHSGSMTRR TPLLAELDPE PFVYVPRELA
RKLGVNSGDY VEIITARGSI KMRAYVTEGE AYLTVNGRQL PHVNVVWAFS FLGYVTGPQG
NFISPDVGDV VTTIQETKAW IGKIRKAEVV
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