Gene Tpen_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1397 
Symbol 
ID4600461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1351094 
End bp1351609 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content60% 
IMG OID639774172 
ProductDNA polymerase beta subunit 
Protein accessionYP_920797 
Protein GI119720302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTG GCGTTGAGCA TATCCCGGAG CCTTACAGGG CGTTGGTTGT CGGGCTACTA 
GAGTCCCTGC TAAGGCTCTA CGGGGGCTCC CTGGTTTCCC TGGTCGTCTA CGGTAGCGTG
GCTAGGGGGA GCCCGAGGAG GGACAGCGAC CTGGACTTGC TCGTAGTCTT CGAGGATTTG
CCGAAGTCGA GGGTGGAGAG GGTTAGGCTG TTCGAGAGGG CTGAGGACGA GGTACAGCCG
TTGCTCGACG AGCTGATGGA GAAGGGGTAC TACGTGTCCT TGTCCCCGGT CATCAAGACT
AGGGAGGAGG CTGGGAGGTT CTCGCCGCTA TACCTGGACA TGGTCGAGGA CGCGGTGATA
GTATACGACA AGGGCGGCTT CTTCGAGGGC GTGCTGAGGG CGCTGTCGGA GAGGCTGAGG
AGGCTCGGAG CTAGGAGGGT GTGGGTGAGC GGTAGGGCGT GGTACTGGGT GTTGAAGGGC
GAGTACAGGT TCGGCGAGGT GGTAGAGCTT GAATAA
 
Protein sequence
MKFGVEHIPE PYRALVVGLL ESLLRLYGGS LVSLVVYGSV ARGSPRRDSD LDLLVVFEDL 
PKSRVERVRL FERAEDEVQP LLDELMEKGY YVSLSPVIKT REEAGRFSPL YLDMVEDAVI
VYDKGGFFEG VLRALSERLR RLGARRVWVS GRAWYWVLKG EYRFGEVVEL E