| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1246 |
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| Symbol | |
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| ID | 4600541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1181816 |
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| End bp | 1182874 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639774022 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920647 |
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| Protein GI | 119720152 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCTAG CTAGCTATCT GGTGAGGAGG CTTGCAACGT TTCTCCCGAG CGTCCTCGGG
GCGCTCCTCA TAACCTACCT CATAGCCTAC GTTATCCCCA CGGACCCCGT GAGGGCGTGG
GTAGGGGAGA AGCTCATGGA CCCCTCGACC CTAGAGAGGC TGAGGAAGGA GTACAAGTTC
GACGCGCCGT GGTACGAGCA GTTCGCCTTC CTGGTCGAGA AGCTCCTAAC GGGCACGCTC
GTAGACCCCA CCAGGGGTAT CCCCGTCGTC CAGCAGGTGG CGCAGAGGTT CCCGATAACC
GTCGAGCTGG CTATATTCGG CATGCTGTTC ACAGTGGCTA TAGGCATACC GCTGGGGATA
CTGGCAGCGG CGAAGAAGGA CAGCTTCGTG GACTTCTTCG TAAGGGTATT CGCGCTCTTC
GGGAGCTCCA TGCCGGCCTT CGTGCTCTAC TACTTCCTGA TACTGGCGTT CTACGTCTAC
GTGAGAGCCT CGCTACTAGC CGGGGTTCCC TCCCTGTCTC CAGCGTGCGC CGCCAGCCTG
GACTCCGTCA GGAACGCGGT TCCCCTCCTG GGCTACGTCG TGTGGGCGGT AGGCCAGGTC
CCGATGTTCG GCGGTCTCAT GTGCGGGGAT CTGGGGGTTG TCTCTGCGAC GTTCGTTAGG
ATGTGGCTTC CGGGGTTGGC GCTGGGGCTC CTCTCCGGCG GCTTCATAGC GAGGATAGTT
AGGAACAGCT TGCTCGACGC GCTGAGTTCG GACGCGATCC TCTTTGCAAG GGCAAGGGGC
CTTACGAGCG GCAGGATATG GCGGCACGCC TTGAAGAACG CGTTCGCGCC TATAGTCACG
ATTCTCGGCC TCAACTTCGC CGGCCTGCTC ACGGGCGCCG TGATAGCGGA GACTGTCTTC
AATATCCCCG GCATGGGGCT CTACATGTAC CAGGGGATCA CGAGGCTGAA CTTCCCGATA
ATAATCGCCG GGACGTTCAT ATTCTCGGTG ATATACATCG TGATGAACCT CCTGGTAGAC
CTCGTCTACG CGCTGATAGA CCCGCGCGTC AGGTACTAG
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| Protein sequence | MGLASYLVRR LATFLPSVLG ALLITYLIAY VIPTDPVRAW VGEKLMDPST LERLRKEYKF
DAPWYEQFAF LVEKLLTGTL VDPTRGIPVV QQVAQRFPIT VELAIFGMLF TVAIGIPLGI
LAAAKKDSFV DFFVRVFALF GSSMPAFVLY YFLILAFYVY VRASLLAGVP SLSPACAASL
DSVRNAVPLL GYVVWAVGQV PMFGGLMCGD LGVVSATFVR MWLPGLALGL LSGGFIARIV
RNSLLDALSS DAILFARARG LTSGRIWRHA LKNAFAPIVT ILGLNFAGLL TGAVIAETVF
NIPGMGLYMY QGITRLNFPI IIAGTFIFSV IYIVMNLLVD LVYALIDPRV RY
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