Gene Tpen_1241 details

Gene Information

• Locus tag: Tpen_1241
• ID: 4600536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 1177078
• End bp: 1177521
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 639774017
• Product: RpiB/LacA/LacB family sugar-phosphate isomerase
• Protein accession: YP_920642
• Protein GI: 119720147
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGGTAG CTTTCGGGGC GGACGATAAC TACTCGATAG CGAGGTTCGT AGTAGAGGAG 
CTTAAGCGCA GGGGCCACGA GGTCGTGCTG GTAGGCTCCC CGCTGACGGG GAAGCCCTAC 
CCCTGGCCAA AAGTGGCTGT GGAGGTTGCG GAGCTCGTTG CGAGCGGCAA GGTGGATACG 
GGGATAGTCA TGTGCTACAC CGGGACGGGG GTGAGCATAG CCGCGAACAA GGTCAAGGGA 
GTCAGGGCTG CTCTCTGCAC CGACGCGAAG AACGCCAGGG GCGCGCGCCT GTGGAACGAC 
GCCAACGTGC TCGCGCTAAG CGCGAGGCTC CTCTCGGAGG AGGTCGCGAA GGAGATACTC 
GACGAGTGGT TCTCGGTCGA GAAGCCGGAC CCCAGCGAGC TGGAGAACAT AGAGTTCGTG 
AAGAAGCTGG ACCTCTCAAG GTGA 

 

Protein sequence

MKVAFGADDN YSIARFVVEE LKRRGHEVVL VGSPLTGKPY PWPKVAVEVA ELVASGKVDT 
GIVMCYTGTG VSIAANKVKG VRAALCTDAK NARGARLWND ANVLALSARL LSEEVAKEIL 
DEWFSVEKPD PSELENIEFV KKLDLSR