| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1197 |
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| Symbol | |
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| ID | 4600389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 1136152 |
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| End bp | 1136895 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639773973 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_920598 |
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| Protein GI | 119720103 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGAGC TCAGCCTGCC TTGGGGCTTT GCCAACCTAC TACTCTTCCT GGCTAGCATA
GCGCTGACGG TCGTAGCCGG CTACCTTTTC TCGGTGGTAG TGAGGAAGTC GCTAGGAAAG
ATCAACCCCC TCCTCTCCGA GATAATCAGC CGCTACGGCT CATGGACTAT CTACGTGGTA
GGGCTCCTTG TGTCGTTAGA GCTCCTGAAC CTGAGGCTCG AGACAGTCCT CGTGTTCACG
GCGCTTCTAG GCGCGCTTGT AATCCTAGGC TTGAAGGACG TGCTACCGAG CATCTTCGCA
CGGCAGTTCC TCGAAATGTA CAAGCCTTTC AGGGTTGGAG ACTGGATTAG GGTCGGCGAT
ACTTGCGGAA GAGTGATCGA CGTCAACGAC CTCTACACGG TCGTCTTCAC GTCGTCCCAC
GAGAAGCTCT ACATCCCGAA CAGCAGGCTT CTGCAGGAAA GGGTGTACAA CCTGACCGCG
GGTACAGGCT TCTACGTCGA CGTAGACTTC GCCGCGAGCC CCTCGGAGGG GTTAGACCAG
CTACTGAGGA AGGTCAAGGG CGCCATCGAG GAGGAAGCCA AGGAGGAGGG GCTCGAGGAG
CCGGAGATCT TCGTCGTAGG GCTTGAGCCC GACGCGGTTT ACCTGAGGGT AAGAGTGAGG
GTGCTTAACC CCCAGAGGAA GGACGAGGTA AGGTCGCGCT TACTCAGAAG GGTGTACAAA
GCGGTCAGGG CGACGAGGGA GTGA
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| Protein sequence | MFELSLPWGF ANLLLFLASI ALTVVAGYLF SVVVRKSLGK INPLLSEIIS RYGSWTIYVV
GLLVSLELLN LRLETVLVFT ALLGALVILG LKDVLPSIFA RQFLEMYKPF RVGDWIRVGD
TCGRVIDVND LYTVVFTSSH EKLYIPNSRL LQERVYNLTA GTGFYVDVDF AASPSEGLDQ
LLRKVKGAIE EEAKEEGLEE PEIFVVGLEP DAVYLRVRVR VLNPQRKDEV RSRLLRRVYK
AVRATRE
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