| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1175 |
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| Symbol | |
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| ID | 4602041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1116583 |
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| End bp | 1117497 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773951 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_920576 |
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| Protein GI | 119720081 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGCGGC TTTCTAGGAG GATGTCGAAA TACCTCGTCA TGGCGCTCTT CCTCCTTCCC
GCCGCGGCGA TCATAGTGCT TTTCCTAGTC GTACCCTCCG TACTCACTAT CCTAATCTCT
TTAACAAACC TTGACTACAG GTTTAAGTGG GAGTGGGTCG GTCTCTCTAA CTACCAGACG
TTCGTCTCGG ATCCTAACAC GCCGATATTC GTTAGGAACA CCATAATATA CGTTACCGGT
ACCCTCGCTT TCAACGTCGG GGTCGGCCTC CTTCTTGCGC TTCTCTCCAC GCACGTTCAC
GATGCGCTAG GAACCTTCAT GAGGGCTGCC TGGTACCTGC CGAGGGTTCT TCCGAGCGTT
ATATGGGCTT TCGTAATGAT GTGGATATTC TCACCTATGG ATACGGGCTT CCTGAACTCG
TTGCTGAAGA GCGCTGGCCT CTCGCCGGTA CCCTGGACCT TCAAGTATTA CTGGCCCTTC
CTCTACATAG TTAACGGCTT TATAGGGTGT AGCCTGGGAA TGGTCATCTT CAGTAGCGCG
ATCAAGTCGA TACCCCAGGA CCTCATAGTC GCCGCCAAGG TTGACGGTGC GTCAGGTCTG
ACGATCGTGA GGAGGATAAT ACTGCCCCTA ATCAAGTGGC ACATAGCCTT CGTGGTCGCC
TACCAGACCC TCTCCCTGCT AGCCTCCTTC GAGTACATAC TGCTCACCCT GGACGGGGGA
CCGGGCTACT ACTCCACGGA GGTCATGATC CTGCAAGCGT ACCACCTGGC GTTCGGGCAG
TACCTCGCCG CCATGAGGTA CGGCTACGCC GCAGTCTTCG TGACAATACT CCTGGTGATA
GGCCTTGTCC TCTCGGTAGT GTACTGGAAG GTCTTCCGCC TGCATAAACT TATGGCGGAG
CCTGTGCTCG AGTGA
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| Protein sequence | MVRLSRRMSK YLVMALFLLP AAAIIVLFLV VPSVLTILIS LTNLDYRFKW EWVGLSNYQT
FVSDPNTPIF VRNTIIYVTG TLAFNVGVGL LLALLSTHVH DALGTFMRAA WYLPRVLPSV
IWAFVMMWIF SPMDTGFLNS LLKSAGLSPV PWTFKYYWPF LYIVNGFIGC SLGMVIFSSA
IKSIPQDLIV AAKVDGASGL TIVRRIILPL IKWHIAFVVA YQTLSLLASF EYILLTLDGG
PGYYSTEVMI LQAYHLAFGQ YLAAMRYGYA AVFVTILLVI GLVLSVVYWK VFRLHKLMAE
PVLE
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