| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1100 |
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| Symbol | |
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| ID | 4600967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1037629 |
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| End bp | 1039233 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639773877 |
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| Product | PTS system mannose/fructose/sorbose family IID component |
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| Protein accession | YP_920502 |
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| Protein GI | 119720007 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.220553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCA TAGGCCCACT CGAGGTAGGG CTTCTAGGAC TGCTAGCCTT CATCTTCGGA
CTGGACTACA TCTGGGTAAC ACCTCTCGGA ATCTGGCGCC CCGTGGTCGC GGGGACCCTC
ACAGGCATTA TTCTAGGAGA CCCCTTGACA GGGCTACTCG TAGGCTCGCT ACTAGAGTTC
GTGTTCGCTG GGCTATTCAC GATAGGAGGC GGGACCGTTC CGGAGGCTGC TAGCGGGACG
ATAGCCTCCG TGGTTGTCGC CGTTACTACG GGGTTAAAGC CTGAGGCGGC GGTACCGCTG
GCTATACCCG TAGCAGTGCT TACAATGAAC TTGGAGATAG TTGTCAGGTC TTTCGACGCG
GTGTTCACGC ACTGGGCTGA CAGGGAGATA GAGAGGGGGA ACTACGGGGC AATCCCCCTG
ATAAACATTC TCGGCGCGGT ACCATGGGGG CTCAGCAGGG CAATACCTAT CTGGCTATTC
GCGGGAGCCT TAGCCATAAA CCCACAGGCC GTTAAAGCGG CGATAGATGC CCTCCAAGTG
GTTCAAATCG GACCCTTCAC GGTGCGCTTC TGGGACGCGA TGGCAGTCGC GGGCGCCGTA
CTCCCAGCGC TCGGTGCCGC CATTCTAATG AAACTCATGA TCTCGCGTAG GAACGTGATG
TTCTTTGTAC TCGGCTTCGC TCTCGCAGCC TACCTGAAGC TAAGCCTCCT GGCGATAGCC
CTCGTAGCGG GATCCATAAT CTTCGCTATC TACTACTTCA CCCACCGCGA GGCATTGGAG
GCTGGAGCCG CGGTAACCAC AGCGGCACCA CCCACCGGCA AGGCAACGAC GAAGGACTTC
ATAAGGTGGT TCGGGGTCTC ATGGTTCATA CAGTCGTCCT GGAACTACGA GAGAATGATG
GGGACAGGCT TCGCGCACGG TATGCTTGAA ATAGAGAAGA AGCTTAGAAA GGACCCGGAG
GAGCTGAAGT CCTGGATGAG GCTACACAAC GAGTTCTACA ACACCGAGCC CCACCTCCAC
AACGCCATTT ACGGGATGGT GATATCCCTA GAGGAACAGG GGGCGGATCA GGATACGATA
AGAGGAGTCA AAACAGCGCT TATGGGTCCA TTCGCAGGGC TCGGAGACTC GATAATGTGG
TTCACGATCC TCCCGATAGC GTTCCTCTTA GGAGCCTCGC TGGGAGCCCA GGGCAACATA
CTCGGCCCGG TAATAGCGCT ACTGATATGG ATACCAGTCT CCTGGGCCGT TAAGTACTAC
ACGCTCGTCT ACGGGTACAA GTACGGCTTA TCCCTGGCGG AAATACTCAA GGGAGAAGTC
CTGAAGATAT TTAGGGAGGG TATAGCAGCC TTCGCGATGG CAATGGTCGG AGGAATCGCG
GCGACATACG TCAGGGCGAC AACCCCGATA GTACTGGCCC AGTACGCTGG TCACGCCATT
AAGCTACAAC CAGTACTGGA CCAGTTGATG CCATCCCTGC TCCCACTGCT CTTCACCCTC
TACGCCTACT GGCTAATAAA GGTCAAAGGC TACAGCTACG GTAAAGCCGT CGTCATACTC
TTCCTCACGG CATTCATACT CGCACTGCTA GGAGTACTCG GTTAA
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| Protein sequence | MATIGPLEVG LLGLLAFIFG LDYIWVTPLG IWRPVVAGTL TGIILGDPLT GLLVGSLLEF
VFAGLFTIGG GTVPEAASGT IASVVVAVTT GLKPEAAVPL AIPVAVLTMN LEIVVRSFDA
VFTHWADREI ERGNYGAIPL INILGAVPWG LSRAIPIWLF AGALAINPQA VKAAIDALQV
VQIGPFTVRF WDAMAVAGAV LPALGAAILM KLMISRRNVM FFVLGFALAA YLKLSLLAIA
LVAGSIIFAI YYFTHREALE AGAAVTTAAP PTGKATTKDF IRWFGVSWFI QSSWNYERMM
GTGFAHGMLE IEKKLRKDPE ELKSWMRLHN EFYNTEPHLH NAIYGMVISL EEQGADQDTI
RGVKTALMGP FAGLGDSIMW FTILPIAFLL GASLGAQGNI LGPVIALLIW IPVSWAVKYY
TLVYGYKYGL SLAEILKGEV LKIFREGIAA FAMAMVGGIA ATYVRATTPI VLAQYAGHAI
KLQPVLDQLM PSLLPLLFTL YAYWLIKVKG YSYGKAVVIL FLTAFILALL GVLG
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