| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0894 |
|---|
| Symbol | |
|---|
| ID | 4600471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 843946 |
|---|
| End bp | 845562 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639773673 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | YP_920298 |
|---|
| Protein GI | 119719803 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGG ATCTTTTACT CTCGATAGAT ATCGGCACCA CTACTGTGAA GGCTGGGCTC
TTCCATTCGA ACGGCTCGCT CCTCGCACTA GACGGGAAAG AGTACCCGAC CTACTACCCG
AGGCCCGGCT GGGCGGAGCA GGATCCAGAC GACTGGTGGA GGACTTCCGT GGAGGTTGCT
AGGAACGTAT TAAAGAAGGC AGGCGTCGAC CCCAGCAGGG TTGCCGGCAT ATGCGTCAGT
AGCCAGAGGG AGACTCTCGC CTTGGTGGAC AGCGAGGGTA GGAGCCTCGG GCGCGTGCCT
ATCTGGATGG ATAGGCGTAG CTCCCCGCAG GCGGAGAGGA TAAAGAGCAG GGTCGACCCC
GCCGAGATCT ACAGGAAGAC CGGGCTCGTC GTGGACGCTA CGTTTACAGC GACGAAGCTT
CTCTGGTACA AGGAGAACGA GCCGGAGGTG CTTAGAAGAG CTAGGCTCGG CCTCCAGCCG
AAGGACTACG TTGTGTACAG GCTTACCGGT GTAGCTGTGA CGGACCACAC GGTGGCGTCG
CGTACGATGC TGTTCAACAT CGTTAAGCTC GAGTGGGACC GTGAGCTCTT CGAAGAGCTA
GGGCTCTCGG AGTACGCGGG GCTCTTCCCC GAGTCGCGCT ACAGCGACGA GGTTGTCGGG
ACGCTCTCGG AGGAGGCTTC CAGGCTTTTA GGGTTGCCGA GGAGCGTCCA GGTGCTCGCC
GGTATGGGGG ATAGGCAGGC CGAAGTTCTC GGGGCCGGGA TATTCGACTC CAGGAGGGTG
GAGGAGTCGA CGGGTACTGG GTCTACCACC GCGACCATGG TGGACTCGCC GCTCCTCGAC
GAGAAGATGA GGTTCTCGGT GGGCGCCGCC CCGATCAGGG GCAGGTGGGT CGTCGAGGCT
GGTATGAGCA CTGCGGGCGC CATCCTGAGG TGGTTCAGGG ACCAAGTGGC AGACGGTGTC
CAGCTGTTAG CTAGCTCGAC GCGCAGAAGG GCTTACGAGT ATCTGGACAT GGAGGCTGCC
TACGTCCCTC CAGGCTCGAA CGGGCTGATA GTGCTACCCT TCTTCTCCGG CGCCCGTTCC
CCCAGGTGGA ACCCCTACGC GCGCGGAGTG ATATTCGGCT TGACAGTCTA CCATACAAGG
GCGCACATAT TTAGGGCTAT GATGGAGGGA ATAGCCTACG AGATCAGGAA GATCCTAGAG
GTGTTCGCGG AAGTCGGCGT GAAGCCCGGA GAGCTCATAC TGATGGGTGG TGGGGCGAAG
TCCCCTCTGT GGGCCAGGAT AAAGGCTAAC GTGACGAAGA TGGAGGTAGT CCTCCCGGAG
CTCCTCGACG CCGCCCTCGC TGGCGACGCG ATGCTCGCCA GCCTGAAGCT CGGGCTGAGC
TCCTCGCACG ACGAGGCCGC GAAAAAGTTC TTCAGGGAGA AGGCTAGGAT AAAGCCGGAT
CCCAGAGAGA GCGCGATCTA CGATTCGTAC TACTCGCTCT ACGAGAGGCT GGTCTCAGCT
TCCGAGGCTT TCTTCGCGGA GATATCCTCG CTGGGAGAGG CTACCCCCAC CCCGCCGCCC
TGGGACATAG AGAAACTGGT CCACCTGCTC TTCAAGCTAG AGGAAACAAA CTCGTGA
|
|---|
| Protein sequence | MSGDLLLSID IGTTTVKAGL FHSNGSLLAL DGKEYPTYYP RPGWAEQDPD DWWRTSVEVA
RNVLKKAGVD PSRVAGICVS SQRETLALVD SEGRSLGRVP IWMDRRSSPQ AERIKSRVDP
AEIYRKTGLV VDATFTATKL LWYKENEPEV LRRARLGLQP KDYVVYRLTG VAVTDHTVAS
RTMLFNIVKL EWDRELFEEL GLSEYAGLFP ESRYSDEVVG TLSEEASRLL GLPRSVQVLA
GMGDRQAEVL GAGIFDSRRV EESTGTGSTT ATMVDSPLLD EKMRFSVGAA PIRGRWVVEA
GMSTAGAILR WFRDQVADGV QLLASSTRRR AYEYLDMEAA YVPPGSNGLI VLPFFSGARS
PRWNPYARGV IFGLTVYHTR AHIFRAMMEG IAYEIRKILE VFAEVGVKPG ELILMGGGAK
SPLWARIKAN VTKMEVVLPE LLDAALAGDA MLASLKLGLS SSHDEAAKKF FREKARIKPD
PRESAIYDSY YSLYERLVSA SEAFFAEISS LGEATPTPPP WDIEKLVHLL FKLEETNS
|
|---|
| |