Gene Tpen_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0886 
Symbol 
ID4600829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand+ 
Start bp834761 
End bp835354 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content54% 
IMG OID639773664 
Producthypothetical protein 
Protein accessionYP_920290 
Protein GI119719795 
COG category[S] Function unknown 
COG ID[COG2411] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0118762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGAGC ACGCAAATAC GTTCAACAGG AAGCTAGGAA GGACTTTGAG GTTCAAAGCG 
AAGTATATCG ATATGTTGCT CAGCGGCGAG AAGGTAACGA CGATAAGAAG GGGGATCGTC 
ACGCCTACGA GGGACGAGGT TTTCCTGGAG AGCGATGGGA AGATATACGG CACGGCTAGA 
GTGAAGTCCG TCAGGTATAC CAAGGTAAGT GAGCTAAACA GCGACGACGC CGTCCGGGAC 
GGCTTTGCGG ATAAGGAGGA TTTGAAGAAG GCCCTGAAGG AGATATACCC GGACCTCAAG 
GACGACGAGT GGGTGACAAT AATATTCCTT GAAGACGTGA ACAGGTTCTC CAGCCCGCTC 
CCGCTCGAAG CGTTGCAGAG AGACATAGAC TTCGAGAGAG CCTCCAGAAT AGCGCAACTA 
GCGCTGGCGC ACGGAGTGTT GAACGAGAAG CTCGCCAGGC AGGTTCTCGC TAGGGTCGCT 
CTCTCGGGCG ACGTCAAGGA CGCGGCGAGA AAGCTCGGAG TGGACGAAAA CAAGGTGAAG 
ATAATACTTG CTAAAGCCGT GGAAGAGCTG AGAAAGAGGG GTGTAGAGGT TTGA
 
Protein sequence
MSEHANTFNR KLGRTLRFKA KYIDMLLSGE KVTTIRRGIV TPTRDEVFLE SDGKIYGTAR 
VKSVRYTKVS ELNSDDAVRD GFADKEDLKK ALKEIYPDLK DDEWVTIIFL EDVNRFSSPL 
PLEALQRDID FERASRIAQL ALAHGVLNEK LARQVLARVA LSGDVKDAAR KLGVDENKVK 
IILAKAVEEL RKRGVEV