Gene Tpen_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0838 
Symbol 
ID4601547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp788956 
End bp789339 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content59% 
IMG OID639773615 
Producthypothetical protein 
Protein accessionYP_920242 
Protein GI119719747 
COG category[S] Function unknown 
COG ID[COG2164] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.707825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGAAGC TTAAGGTAAT CTTCCCGGAA AGCATAGGCG TCGTGGAAGT CGAGCTGACG 
GGGAAGAACC CTAAGACGCT CGACGCGATA GTAAAAGCAA CGCCGTTCGA GAGCAGGGTT
AACCTTTGGG GTGACGAAAT TTACTTCTCT ACCCCGGCTA GGGTCGGGCA GGAGGTTGGT
CAGGAAGTTG TGGAAAAGGG CGATGTGGCT TACTGGCCTC CCGGCAGGGC TCTCTGCATA
TTCTTCGGCC CCACGCCGGC GAGCAGAGGT GGCGAAATAA GGCCTGCGAG CCCGGTGAAC
GTAATCGGAA GGGTCGTCGG CGACCTTGAA AGGCTGAAGA GGGTTAGGTC CGGCGAGCCC
GTGAGGGTGG AGTACGAGCC ATGA
 
Protein sequence
MPKLKVIFPE SIGVVEVELT GKNPKTLDAI VKATPFESRV NLWGDEIYFS TPARVGQEVG 
QEVVEKGDVA YWPPGRALCI FFGPTPASRG GEIRPASPVN VIGRVVGDLE RLKRVRSGEP
VRVEYEP