| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0816 |
|---|
| Symbol | gltX |
|---|
| ID | 4601986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 768174 |
|---|
| End bp | 769883 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639773592 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_920220 |
|---|
| Protein GI | 119719725 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00463] glutamyl-tRNA synthetase, archaeal and eukaryotic family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGTCG ATATTAGAAG GGTAGCCCTT AAACACGCGT TAGCCAACGC CGTTAAGTTC
GGCGGAAAGG CTAGGGTGGA CTCCGTTGTC AGCAAGGTGT TCGCCGAGGT TCCCGAGGCT
CGCAAGGCGG CCAAGGAGGT CGTGGAGCTG GTCAAGGAGG TCGTAGAGGA GGTAAACTCC
ATGAGCCCCG AGTCTCAGGC CAGCCTACTC TCAGAGCTGT GGCCCGAGGC GCTCTCAGGT
GAAAGGAAAG TAGAGGTGAA AAGGTTGCCT CCGCTTCCGG GAGCGGAAGA AGTGGGCGGG
AAGGTCGTGA CGAGGTTCGC GCCCAACCCT GACTTCGTCC TGCACCTTGG GAGCGCGAGA
CCAGCGATAC TCAACTACTA CTACGCCAAG AAGATGTACA ACGGCAAGTT CATCCTGAGG
TTCGAGGATA CGGATCCGAG AACCAAGCGG CCTATGCCAG AGGCCTACGA CCTTATACGC
GAGGATCTCC GCTGGCTCGG AACGCCGTGG GACGAGGAGT ACATTCAGAG CCAGCGCATG
GAGGTTTACT ACGAGGTGGC GGAGGCACTG ATAAAGAGCG GAAACGCATA CGTTTGCACG
CATAGCCAAG ACGAGATAAA GGCGTTCCGC GACGCCGGCA AGCCGGATCC CTGCTCGTTC
CTCCCGCCAG AGGAACACAT GGAGAGGTGG GAGAAGATGC TTTCTGGGGA GTACCCGGAG
GGCGCCGCAG TGCTGAGGAT AAAGACAGAC CCCGCCCACC CCAACCCCTC TGTCAGGGAC
TGGATAGCCT TTAGAGTGCT CGACACCGAG AAAACACCCC ACCCTCTAAC GGGAGACAAG
TACAGGGTTT GGCCTACGTA CAACTTTGCC TGTGCTGTGG ACGACCACAT GCTGGGAGTG
ACCCACGTCC TGAGAGGCGA GGAGCACGCG GTCAACACCC TGAAGCAAGA GTACGTTTAC
AGGCACATGG GCTGGAAGCC TCCTGTAAGC ATACACTTCG GGAGGATGAA CTTGGAAGGC
ATGGTTCTCA GCAAGTCGGT CATTAGGAGG GGGATCGAAA AGGGGCTTTT CTCGTCTATA
GACGATATAC GCCTCGGAAC TCTGAGGGCC TTGAGGCGTA GAGGGATACT GCCCGAGGCG
ATATGGGACT TGGTTCTGGA AGTCGGGATC AAGCCCTCCA CGGCGCGGGT GAGTGTAGAC
AAGCTCCACG CTTTCAACAG GAAGTACCTA GAGCCGCGGG CCAACAGGTA CATGTTCGTC
CCAGAGCCCG CCAAGGTAGC CTCCATAGAG GGGCTGGAGG CCCCGATAAC GGCGGAGGTC
ATAGTCCACC CCTCCTTCCC CGAGAGGGGC CGCCGGAGGA TAACCTTCAG CAAGCCCGAG
GTCTACCTAC CCTCCGACGT GGCATCCTCC ATGGTCAGGC TGATGGGGCT CGGGAACTTC
GAGGTCGTCG ACGGCGGTTC GAAGCTGAGA TACCTGAACA ACGACGTGAG CTTCGCGAAG
AAGCACGAGC TACCCATAGT GCAGTGGGCC CCGGTAGAGA GCTCGGTGAG AGGCAGGGTG
CTGAAAGCCG CGGGTACAAA GATCGAGGAA ATCTCGGGCT ACGGTGAGCC TAGCCTCGCC
GAGCTCCCCC CGGGGGAGCA AGTCCAGTTC GTTAGGCTGG GGTTCGTCAG GGTAGAGGGG
CCGGAGACGT ATATATTCAC GCACGATTAG
|
|---|
| Protein sequence | MEVDIRRVAL KHALANAVKF GGKARVDSVV SKVFAEVPEA RKAAKEVVEL VKEVVEEVNS
MSPESQASLL SELWPEALSG ERKVEVKRLP PLPGAEEVGG KVVTRFAPNP DFVLHLGSAR
PAILNYYYAK KMYNGKFILR FEDTDPRTKR PMPEAYDLIR EDLRWLGTPW DEEYIQSQRM
EVYYEVAEAL IKSGNAYVCT HSQDEIKAFR DAGKPDPCSF LPPEEHMERW EKMLSGEYPE
GAAVLRIKTD PAHPNPSVRD WIAFRVLDTE KTPHPLTGDK YRVWPTYNFA CAVDDHMLGV
THVLRGEEHA VNTLKQEYVY RHMGWKPPVS IHFGRMNLEG MVLSKSVIRR GIEKGLFSSI
DDIRLGTLRA LRRRGILPEA IWDLVLEVGI KPSTARVSVD KLHAFNRKYL EPRANRYMFV
PEPAKVASIE GLEAPITAEV IVHPSFPERG RRRITFSKPE VYLPSDVASS MVRLMGLGNF
EVVDGGSKLR YLNNDVSFAK KHELPIVQWA PVESSVRGRV LKAAGTKIEE ISGYGEPSLA
ELPPGEQVQF VRLGFVRVEG PETYIFTHD
|
|---|
| |