| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0792 |
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| Symbol | |
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| ID | 4601253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 745135 |
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| End bp | 746796 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639773569 |
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| Product | starch synthase |
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| Protein accession | YP_920197 |
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| Protein GI | 119719702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0297] Glycogen synthase |
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| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCGG ATAGAACGGT CTTAATGGTA GCGTTCGAAG CAACGCCCTT CGTGAAGGTC
GGCGGCCTCG CGGAGGTTCC GAGCAACCTG GCGAAGGAGC TGGTCGCCCT AGGGTGGAGA
GCCTACCTCG CCTTGCCGTC GCACGCGCCT CCGGGCAGGA GGGGGGAGGA GCCAGTGGCC
CGCTTCGCGA CGCCTCTAGG AGAAGTCTTC GTTGGCAGGG CTTCCTGGGG CGGCGTCACG
TACCTGCTCT TCTCGGGATC CGCGCTGAGC GACGAGAGGG TGTACGCCGG CGAGGTAATG
GACCAAAAGG TGAAGCTCTT CTCGTACGGG CTATCCCTCC TACTGCTGAA CGCTGAGAAG
TACGGCGTAG TGTTCCCGGA CGTCATACAC TTCCACGACT GGCACAGCGT GTATGCGCTC
GTGAAGGTGA AGCACGACTT CCAGCAGAGG AAGGCTCGGA CGCTGTTCCA TGTCCACCTG
CTCGTGAAGA AGCACGTAGA CCCCTCGATT TTCGAGCAAC TAGGGGTACC CCTCGGCTGG
AGGCACGAGG TGAGGGTTAA CGGTAGATCC ATGGACCTAA CCCTAGGCGA CGTGCTGAGA
GTTTCAGGGG GTATCGCCGA GAAGATAGGA GCCCTCGAGG CCGACCGGCT AGTAACGGTG
AGCGAGTCCT ACCTTCTGGA CGACGTGCTC CCGTTCGTGG GAGGCGAGTT CCGCGGCAAG
TCTAGGGTAA TCTACAACGC CACCACATGG AGCCTGAGGG GGGCCTTGGA GGAGGTACTC
GGCAAGCACG GGCAAAGGCT ACGCTCCTTC GCTGGGCGTA GCGAGGGCTT CAGGAGGACC
GAGATAAGGA AGTACTTCCT GCTGAGGGCA CTTGGAGAGC TCGAGGAAGG CGAGCCCGAG
GTACCGGACG AGAGGATAAA GAAGCTCGTC TACGACCTGG CGGATCCACC CATGCGCGGT
CAAGGCAAGG TTGAACCCTT CATGTTTGAC GGCCCCCTAG CCATAACGAC CGGGAGGCTT
GCCAGGCAGA AAGGCTTTGA CTTGATGGTA GAGGCTGTGC CGAGAGTGCT GAGGGAGCTC
GGGGAGGCTA AGTTCGTCTT CCTCGTGCTA CCCGTCTGGG GCGGGGAGGA CTACGTGTAC
CAGCTTGCAG ACCTCCAGCG CGAGTACCCC GAGAACGTGC GCGCAGTCTT CGGCGTAGCG
CCCTCGATAT ACAAGCTGGC GCACCTCGCC TCCGATGTGT TCTTCGCTCC TTCGAGGTGG
GAGCCCTTCG GGATAATGGC TCTGGAAGCC ATGTCAACCG GGAACCCCCT CGTGGCTTCG
AGGACCGGGG GGTTGAAGGA GATAGTGCTG GACGTAAACG TGTACGCAGA GAGGGGTACA
GGGATCCTCG TAAGACCCGA CGACCCCTAC GAGCTCGCAG AGGCGCTGAG AGACCTCCTC
GCCTTCATGG AGGCTTCGAA CACGGGCAGG ATTGAGTGGT ACGCGGGCAA AATAGAGAAC
AAGACGCTGA GGCGCATGCT CGAAGAGTAC CCGGACGCGG GCGAGATTCT CAGGAAGAAC
TGCGTGGACA GGGTTGAAAA ACACTTCTCG TGGGCGGCCT CCGCGAGGAC GGCAGATTCT
ATCTACAGAG AGTTGCTAGA GGGAGGACAG GAGACTCTGT AG
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| Protein sequence | MNPDRTVLMV AFEATPFVKV GGLAEVPSNL AKELVALGWR AYLALPSHAP PGRRGEEPVA
RFATPLGEVF VGRASWGGVT YLLFSGSALS DERVYAGEVM DQKVKLFSYG LSLLLLNAEK
YGVVFPDVIH FHDWHSVYAL VKVKHDFQQR KARTLFHVHL LVKKHVDPSI FEQLGVPLGW
RHEVRVNGRS MDLTLGDVLR VSGGIAEKIG ALEADRLVTV SESYLLDDVL PFVGGEFRGK
SRVIYNATTW SLRGALEEVL GKHGQRLRSF AGRSEGFRRT EIRKYFLLRA LGELEEGEPE
VPDERIKKLV YDLADPPMRG QGKVEPFMFD GPLAITTGRL ARQKGFDLMV EAVPRVLREL
GEAKFVFLVL PVWGGEDYVY QLADLQREYP ENVRAVFGVA PSIYKLAHLA SDVFFAPSRW
EPFGIMALEA MSTGNPLVAS RTGGLKEIVL DVNVYAERGT GILVRPDDPY ELAEALRDLL
AFMEASNTGR IEWYAGKIEN KTLRRMLEEY PDAGEILRKN CVDRVEKHFS WAASARTADS
IYRELLEGGQ ETL
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