| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0768 |
|---|
| Symbol | |
|---|
| ID | 4601090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | - |
|---|
| Start bp | 719798 |
|---|
| End bp | 721129 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639773544 |
|---|
| Product | Fmu (Sun) domain-containing protein |
|---|
| Protein accession | YP_920173 |
|---|
| Protein GI | 119719678 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.534408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAGCT CCGAAGCCTT TCTAGAGGAT CTCACGCCTA AAACGTTCAG AGCGGCCTCC
CTGGTTGTAG AGAGGGTTCA GCGCTGGAAG GCTTCCCTCG ACTACTCGTT CCAGTCTGTG
AGAAAAGAGT TCAACCTGAG CAAGCCGGAG GCTAGGACTG TGTACGCGTT GGCAAGGCTT
ACTCTCCTCA ACGTCGGCGT AGCGATACTG GCTTTGAAGA AGCTCGGGAG ATCCGGAATC
CCTCTGAGGA GAAAAAGCGC TTTCTACGTA GCTGTAGCGC TCGTACTCAA GTACCCGGGC
TTCGAGAAGA GGGTAGAGTC TCTGCGCGGC GGGCTAGTGA GCAACGTGCT ACTGTCGAGC
ATCACTCCGC GTTTTCTCGA AAGGCTGATC GAGGAAGCCA GGGAGCTCGG ATGTCGCGAC
AGGATCGCGT ACCTCTACTC GGTACCTCCC CTCGTCTCAG AGGTCCTCGT CGAGAACCTG
GGGTGCGCGA GGGCAGAAGA AGTCGCCAGG TCCTTCGAGA GGAGGTTTGT GTGGCTGAGG
GCTGTCGGCG AGAAGGGGCG GGAGAAACTC GAGGAATTCC TAGTAGGCCT CGGCATCAGG
TTTAGGCGAG ACCCCGAGAT CGACGGCCTC TACGAGCTAC TCCTCCCAAG CTACGAGCCC
CTACCCGAGG TGAGCCCGGA GCTCGCGGTG TACCAGGATA AGGCGAGCGT AGCGGTGGTT
ATGGAGCTGG TAAAGCTGGG AGAGACATGC GTCTCTACGT GCATCGACGC GGCGGCGGCT
CCCTTCATGA AGACATCCCT GTACTGCGAT GCTAGGCGTT GCTGCGACGA GATACTAGCG
GTCGACATTT CTTTCAACCG TATAAGGGAC TCTAGAGGCG TGCTACTGGG TTGCCGCAAG
ATTGTCCACA TCGTTAACTC GGACTCGAGG TTTCTAGCAA CTCGTACGCT CTTCGATGAG
GGATTGGTGG ATGCTCCGTG CACGAACAGC GGAGCAATAG GGAAGGACCC GGGGCTGAGG
CTATCCCTCT GGGAGCTCGA CAGGGAAGAG GTAGCCCTGT ACTCCACCAG GCAGAGGGAA
ATACTGAGGA ACGTTCTTAG GCACATGAAA CATGGAGGTA GAGTAGCATA CTCCACGTGC
TCAGTCCTCC CGGAGGAGGG AGAGGAGGTT GTAAAGGACG TCGCCGCGGA CGGGGAGTCC
TCCCTGCTGA GACCTCCCTT ATTCTTCGAC GAGGCTTACC CTAGGTACGG CTTGAGGGGG
GTTGCGACGA GGACTTTCCC AGATAAGCAT AGGTCCGAGG CCTTCTTCAT AGCGCTTCTC
GAAAAGAAGT AG
|
|---|
| Protein sequence | MSSSEAFLED LTPKTFRAAS LVVERVQRWK ASLDYSFQSV RKEFNLSKPE ARTVYALARL
TLLNVGVAIL ALKKLGRSGI PLRRKSAFYV AVALVLKYPG FEKRVESLRG GLVSNVLLSS
ITPRFLERLI EEARELGCRD RIAYLYSVPP LVSEVLVENL GCARAEEVAR SFERRFVWLR
AVGEKGREKL EEFLVGLGIR FRRDPEIDGL YELLLPSYEP LPEVSPELAV YQDKASVAVV
MELVKLGETC VSTCIDAAAA PFMKTSLYCD ARRCCDEILA VDISFNRIRD SRGVLLGCRK
IVHIVNSDSR FLATRTLFDE GLVDAPCTNS GAIGKDPGLR LSLWELDREE VALYSTRQRE
ILRNVLRHMK HGGRVAYSTC SVLPEEGEEV VKDVAADGES SLLRPPLFFD EAYPRYGLRG
VATRTFPDKH RSEAFFIALL EKK
|
|---|
| |