| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0734 |
|---|
| Symbol | |
|---|
| ID | 4601141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermofilum pendens Hrk 5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008698 |
|---|
| Strand | + |
|---|
| Start bp | 682967 |
|---|
| End bp | 683440 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639773510 |
|---|
| Product | ribosomal protein L13 |
|---|
| Protein accession | YP_920139 |
|---|
| Protein GI | 119719644 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4352] Ribosomal protein L13E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0451901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC AACAATCCGT GCAACCACCC GAGCCCATCG TGAACGCTGT GAAGCTACGC
AGGTACGGCG GAGTCCCCCC TAGGCCTCTA AAGGTAGGCA GGGGTTTCAG CGAAGGAGAG
GTTAAAGCCC TGGGGCTCAC AGTAAAGGAA GCAAGGCTAC TCGGCATCTA CGTCGACGAG
CGGAGAAAGA CCGTGCACCC AGAGAACGTC GAGGCTCTGC GAAGCTGGCT CAAAGCACTC
AAGGAGCACC TCGAGAGCGG GGGCGAGCTT CCTGAGCCAA CGTTGCCGAA AAAGATCATC
GTGAAGCCGG ACATCCACAG GGTATTCAAG GGTAAAACGA TGGCCGGGAG GAGGGCGCGC
GGCCTTCTCT CGGTAAAGTA CCGCTACACG CACCACTACA AGTGGAAGAA GAAGCAGCGC
GAAAGGCTAC TGAAGAAGAG GCACGAGGCT ACGAGGCACA AAGGAGGAGA CTAG
|
|---|
| Protein sequence | MSGQQSVQPP EPIVNAVKLR RYGGVPPRPL KVGRGFSEGE VKALGLTVKE ARLLGIYVDE
RRKTVHPENV EALRSWLKAL KEHLESGGEL PEPTLPKKII VKPDIHRVFK GKTMAGRRAR
GLLSVKYRYT HHYKWKKKQR ERLLKKRHEA TRHKGGD
|
|---|
| |