Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0685 |
Symbol | |
ID | 4601885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 633452 |
End bp | 634786 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639773458 |
Product | pseudouridylate synthase |
Protein accession | YP_920090 |
Protein GI | 119719595 |
COG category | [S] Function unknown |
COG ID | [COG0585] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCGTC GCGCGGATAG CCAGCTCGAC AGGCTGCTAG GCCTGGAGTA CTACGGTTTA GACGGTGCTG GTACAGGTGG GAAGCTTAGA AGCTCGCTCG ACGACTTCAT CGTAAGGGAG ATATCTATCG ACGGGGAAGT AGCTTCTCCA GAGTGTAAGT ACGCGGAGGG AGCCGGCGAG TTCACCTGGT TGGTGCTCGA GAAGAGGAAA ATAGACACTG TGAGTGCAGC GAGAGCTGTT GCCAGGTTTT TTGGGCTAAA GTTGCGGGAT GTAGGTATCG CGGGTCTCAA GGATACGTCG GCAGTTACGT ACCAGTTCAT CTCCATACCC GGAGAGGTCA AAATGGAATC AATAGAGGAG TTCAACCTGT CGCACAAGCG CGTTAAGCTA CACTGCCCCT TCAGGAGGCC CTTCGCGTTG AAGCCCGGCA TGCTCTACGG CAACTTCTTT AACGTGAAAG TGCGGGGTGC AGAGTGCCTG GAGTGTTTAG AGGCCTTGCT GCGCGAGTTG AAGGAGAAGA AGGCTGTACC CAACTACTAC GGCTACCAAA GATTCGGCAC CGTAAGGCCG GTCACGCACG TAGTCGGCAG GATGATACTC TTAGGAGAGT TTAAGGAGGC GGTCGAAGAG CTGATATACA AGGTCTTCCC GGGGGAGTCT CAAGTGTCAA GGAGGGCCCG CCTTTTCCTC TCAGAGAGCG GCGACCCCCT CAAGGCGTTG GAGCTCTTCC CCAAGTCTCT GAAGAGCGAG AGAGCTGTTC TGAGGCACTT GGCCAGGCAT CCGGGCGACT ACGTGGGGGC TTTGCGCGCG GTTTCGCCCT ACGTGAAGAA ACTCTTCATC GGGGCTTACC AGGCCTACCT TTTCAACAAG TTGCTCAGCA AGAGGATAGA GAGGGGTCTT TCCTACTACT ACCCCGTTCC CGGCGACACG GTTGGGATAT TCAGAGAAAA GAGAGGAGGC GAAGTCACAG GGGTGTTGAA GGTAAACGAC GCCAACGTGG AGAAGGTGAA ACGGTGGATA GACGAGGGCT TTGCAGTACT CCTACTCCCC GTGTTCGGGT ACAACAGCAA CCTTTCGCAC GGAGTCGTCG GCGAGATAGA GCGCGAGTTA CTGAGAGAAG AGGGAATCGA CGTCTCTATG TTCAGGGTGA AGCAAATCCC CGAAGCATCA TCCGCGGGGA CCTATAGGTA CGCCTCCCTA GTGCCCCATG CTCTGAATGT CCGGGTCTTC GGAAACGACT ACGAGCTTAC ATTCGTACTA AACAAGGGAG CCTATGCTAC CACCCTTCTA CGAGAGCTGG TAAAACCCGT AGAGCCGGCG AGACAAGGCT TCTGA
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Protein sequence | MARRADSQLD RLLGLEYYGL DGAGTGGKLR SSLDDFIVRE ISIDGEVASP ECKYAEGAGE FTWLVLEKRK IDTVSAARAV ARFFGLKLRD VGIAGLKDTS AVTYQFISIP GEVKMESIEE FNLSHKRVKL HCPFRRPFAL KPGMLYGNFF NVKVRGAECL ECLEALLREL KEKKAVPNYY GYQRFGTVRP VTHVVGRMIL LGEFKEAVEE LIYKVFPGES QVSRRARLFL SESGDPLKAL ELFPKSLKSE RAVLRHLARH PGDYVGALRA VSPYVKKLFI GAYQAYLFNK LLSKRIERGL SYYYPVPGDT VGIFREKRGG EVTGVLKVND ANVEKVKRWI DEGFAVLLLP VFGYNSNLSH GVVGEIEREL LREEGIDVSM FRVKQIPEAS SAGTYRYASL VPHALNVRVF GNDYELTFVL NKGAYATTLL RELVKPVEPA RQGF
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