Gene Tpen_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0617 
Symbol 
ID4601323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp573705 
End bp575003 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content55% 
IMG OID639773391 
Productadenosylhomocysteinase 
Protein accessionYP_920024 
Protein GI119719529 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTACC GTGTGAAGGA CATCTCGCTA GCGCCTAAGG GAAGGCTGAT GGTCGAATGG 
GCTGAAAGGC ACATGGCCGT TCTTAGGTCT ATAAAGGAGT CGTTCTCGGA GAGGCAGCCG
CTCAAGGGGG TCAAGATAGC GGCGTGCATG CATGTAACCA AGGAAACCGC TGTGCTCATG
CTTACACTAA AGGCTGCCGG TGCAGAGATA GCACTCGCGG CTTCAAACCC GCTCTCGACG
CAGGACCCTG TAGCCGCGTA TCTTGCGAGC GAGGGTGTAA GCGTGTTTGC CTGGAAGGGT
ATGACTGAAA GGGAGTACTT CGAGTCTATT GCTCGGGCTG CATCAATAGA GCCGGATATC
ACTATGGACG ATGGGGGAGA CCTAACGGTA ATGCTTCACA AACTGAGCAT TGGAGAGGCT
AAGGGGCTGG ACTACGAGGT TGCCAAAGAA ATTGTTCCAC CGGATGCCTA CAAGCGCGTA
GTCGGAGGAA CGGAGGAAAC GACGACGGGG GTTATACGTC TAAGAGCCCT CGAGAGAGAA
GGCAAGCTTC TCTACCCAGT CATCGCTGTA AACGACTCGA TGACGAAGTA CATGTTCGAC
AACCGCTTCG GTACGGGGCA GTCCACCCTT GACGGGATAC TCAGGGCTAC AAACATCCTC
CTCGCCGGGA AGAACGTGGT AGTCGCGGGT TACGGCTGGG TCGGGCGCGG AATAGCCTGG
AGGGCTAGGG GCATGGGCGC CCGTGTCATC GTCGTGGAGG CTGACCCTAT AAAGGCTCTC
GAGGCCTACT ACGAAGGCTT CTACGTTACA GACATGCGCG AGGCGTCCAA GATTGGCGAC
GTGTTCATAA CCGCTACGGG AAACAGAGAC GTTGTACGCG AAGAGCACTT CCTGGAAATG
CGGGACGGGG CAATACTCGC GAATGCAGGG CACTTCAACG TGGAGATCTC TGTCGAGGAC
CTCGAGAGAA TCTCTACGTC CAAGAGAAGG ATTAACGAAA ACGTGGAGGA ATATACTCTT
AGGAACGGTA AAAAGCTCTA CCTGCTCTCC GAGGGAAGGC TCGTCAACTT GGCCGCGGCG
GAAGGGCATC CCAGCGAGGT CATGGACCTC TCATTTGGTA ACCAGGCGCT GGCAGTTCAC
CTCCTCTGGA AGAAGAAGGG AAAACTCAAG CCAAAGGTTT ACAGGCTACC TGCTCAGCTG
GACAGAAGAA TAGCGTTGAT CAAGTTGAAG TCCCTGGGAG TAAGGATAGA GAGGCTGACG
CCGAAGCAGG TAGAATACTT AAGGAGCTGG ACCGCGTAA
 
Protein sequence
MEYRVKDISL APKGRLMVEW AERHMAVLRS IKESFSERQP LKGVKIAACM HVTKETAVLM 
LTLKAAGAEI ALAASNPLST QDPVAAYLAS EGVSVFAWKG MTEREYFESI ARAASIEPDI
TMDDGGDLTV MLHKLSIGEA KGLDYEVAKE IVPPDAYKRV VGGTEETTTG VIRLRALERE
GKLLYPVIAV NDSMTKYMFD NRFGTGQSTL DGILRATNIL LAGKNVVVAG YGWVGRGIAW
RARGMGARVI VVEADPIKAL EAYYEGFYVT DMREASKIGD VFITATGNRD VVREEHFLEM
RDGAILANAG HFNVEISVED LERISTSKRR INENVEEYTL RNGKKLYLLS EGRLVNLAAA
EGHPSEVMDL SFGNQALAVH LLWKKKGKLK PKVYRLPAQL DRRIALIKLK SLGVRIERLT
PKQVEYLRSW TA