| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0610 |
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| Symbol | |
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| ID | 4601230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 563553 |
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| End bp | 563933 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639773384 |
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| Product | putative endoribonuclease L-PSP |
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| Protein accession | YP_920017 |
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| Protein GI | 119719522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00344225 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTATTGG AAGTAGTATT CACGGAGAAA GCGCCGAAAC CGATAGGACC TTACTCTCAA
GCCGTTAAGG TTGGCTCTTT GGTGTTCGTC TCGGGCCAGA TACCGATAGA CCCCTCTTCG
GGGGAGATTG TAGGCAAGGA CATCAGGGAG CAGACAAGAA GAGTGCTCGA AAACGTGAAG
GCCATTCTAG AAGCTACCGG AAGCTCTCTC GACAAAGTAG TATACTCTCT AGTCTTCCTA
AGGAACCTCT CCGACTTCAA AGCATTCAAC GAAGTCTACG AGGAGTACTT CAAGAACACT
AAGCCCGCGC GAGTAACAGT GCAAGCGGCC GACATACCCA GAGGGGCACT CGTTGAAATC
TCAGTAATAG CTACTACATA A
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| Protein sequence | MVLEVVFTEK APKPIGPYSQ AVKVGSLVFV SGQIPIDPSS GEIVGKDIRE QTRRVLENVK
AILEATGSSL DKVVYSLVFL RNLSDFKAFN EVYEEYFKNT KPARVTVQAA DIPRGALVEI
SVIATT
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