Gene Tpen_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0591 
Symbol 
ID4600633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp544852 
End bp546123 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content58% 
IMG OID639773366 
Producthydrogenase (NiFe) small subunit HydA 
Protein accessionYP_919999 
Protein GI119719504 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTGA AAGGCATTAG CATCTCACGC CGAGATTTCT TAAAGATGGG CGGAGTGGCA 
GCCCTGCTTG CATCACTGAA CTGGGACGAG CTTGTCAGAC TGGCGGTGGC ACAGGCGCAG
AGCGGTAGCA TAAACATCGT CTGGTTCGAG GCCCAGGACT GCGCAGGAAA CACTACGGCT
TTAATACAGG CCACGGAGCC CGACCTCATA GATGTGCTTG GAGGCTCCTT CCACCTCGTG
GGACCTGGAA ACGTGAAGCT AGCTTTCCAC GAGACAGTAA TGCCTGAGTG GGGTGAGGGG
GCCTTAAGCA TAGCGCGCGC AGCTGCTCAG GGAAAGCTTG ACCCCTTTGT TCTCGTACTC
GAGGGAAGTT TTCCGCAGGA CGAGAAGGCA GGAGGCCCGC CCGGAAGCGA CTCCTACTGC
TACATAGGGG ACGAGAACGG GAAGGTAATA TCCTGCGTAG AATGGATGCG GAGGCTCCTT
CCAAGGGCTG TTGCTGTGGT TACCATGGGT AACTGCGCTT CCTACGGAGG GCTCGTCGCG
AACAAGGTCT TGGAGAGGGT ACCGGGTCTA CCTTCTTCCA GCTGGTCTGA TAGCCCGACG
GGCGCTGTAG GATTCTTCGA CGACCCCATT AGGGGTATCA AGGGCCTTGT AAGCACGTTG
CCGGAAGCCG AACCTTTCAG AAGGTTTATC ACAGGACAGT GCACGCTGAA GCCCGGGGAG
ATAAGGCCCG ACTGTAGGCC GGCGATGGCC GTCCCAGGTT GCCCGGCTAA CGGCAACGGA
CAGCTACGTG CACTAGCTGC TCTTGTTTTG TGGGCTAAGG GGTTGCTACC ATTACCGGAG
CTGGACAAGT ACTGGCGTCC CAAGTTCATA TTTGGGAACA CGGTTCACGA GCAGTGTCCG
AGAGCTGGTA GCTACGCTGC AGGAGACTTC AGAGCCTATC CAGGCGAGAA CTCCTACCGG
TGCCTCTACG CGGTAGGGTG CAAGGGTCCG ATTTCTAACT GTCCTTGGAA CAAGCTAGGG
TGGGTTAACG GAGTCGGAGG ACCCACGAGG ACGGGCGGCG TGTGTATAGG GTGTACTATG
CCGGGCTTTA CGGACGCTTA CGAGCCGTTC TACAAGCCGT TGCAGGCGCC GCGCGTTCCC
AGCGGGTTAG AAGGTGTAGC GGCTATCGCA GCGTTGCTAG CAGGGGTTGG CCTTGCTTAC
GGCGCGTCGA AGAGCATCGA GAAGAGGAAG GAGGAGGTTG CTAAGGAGAT TAAGGAGGTG
AAGGCCGAAT GA
 
Protein sequence
MSLKGISISR RDFLKMGGVA ALLASLNWDE LVRLAVAQAQ SGSINIVWFE AQDCAGNTTA 
LIQATEPDLI DVLGGSFHLV GPGNVKLAFH ETVMPEWGEG ALSIARAAAQ GKLDPFVLVL
EGSFPQDEKA GGPPGSDSYC YIGDENGKVI SCVEWMRRLL PRAVAVVTMG NCASYGGLVA
NKVLERVPGL PSSSWSDSPT GAVGFFDDPI RGIKGLVSTL PEAEPFRRFI TGQCTLKPGE
IRPDCRPAMA VPGCPANGNG QLRALAALVL WAKGLLPLPE LDKYWRPKFI FGNTVHEQCP
RAGSYAAGDF RAYPGENSYR CLYAVGCKGP ISNCPWNKLG WVNGVGGPTR TGGVCIGCTM
PGFTDAYEPF YKPLQAPRVP SGLEGVAAIA ALLAGVGLAY GASKSIEKRK EEVAKEIKEV
KAE