| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0581 |
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| Symbol | |
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| ID | 4600696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 532873 |
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| End bp | 533610 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773353 |
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| Product | exosome complex exonuclease 1 |
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| Protein accession | YP_919989 |
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| Protein GI | 119719494 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCGAG GAGCACCGGA ACGGCTTATA GACGAAAACG GTAGACGAGT AGATGGACGC
CTACCTGATG AAATGCGACC CTTGCGCGTA GAGGCAGGCG TGCTAAAGAA CGCCGATGGA
TCCGCTTACG TGGAGCTGGG GAATAACAAG GTCCTAGCCG CGGTGTATGG ACCCAGGGAG
CCTATGCCCA GGCACGAAGC CCTTCCTGAC AGAGCGATAC TTAAGTGCAG GTACAGCATG
CTCCCGTTCT CCGTGGCCGA AAGGAAAAGT CCTCAGCCTT CGAGGAGGGA GATAGAGCTA
TCGAAAGTAA TTAGGGAGGC TCTTGCTCCG GCAGTCTTCC TCAACGAATA CCCGAGAACA
TCCATCGAGG TCTACATCCA CATACTCGAG GCAGACGGTG GAACAAGGAC TGCGAGTATA
ATAGCGGGAT CTGTGGCTCT CGCTGACGCC GGTATAGCAA TGCGGGACCT CGTAGCGGCA
ATAGCAGTTG GAAAAATAGG AAACGTCCTC GTCCTCGACA TCAACGGTAT TGAAGACCAG
TACGGAGATG GAGATATGCC GATAGCTATG ATGCCTCAGC GCGGGGAAAT AACGCTCCTG
CAGGCGGACG GAGTGTTCAC CCCGCAAGAG ATCGAGGAAG CGTTGAGGCT GGCGCAGAAA
GCCTTCCAAA AGATTTATGC TGAACAGGTG CGCGCGCTTA AGACCAAGTA CGAGTCTGTG
AAAGAGGTGG AGGAATAG
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| Protein sequence | MKRGAPERLI DENGRRVDGR LPDEMRPLRV EAGVLKNADG SAYVELGNNK VLAAVYGPRE
PMPRHEALPD RAILKCRYSM LPFSVAERKS PQPSRREIEL SKVIREALAP AVFLNEYPRT
SIEVYIHILE ADGGTRTASI IAGSVALADA GIAMRDLVAA IAVGKIGNVL VLDINGIEDQ
YGDGDMPIAM MPQRGEITLL QADGVFTPQE IEEALRLAQK AFQKIYAEQV RALKTKYESV
KEVEE
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