Gene Tpen_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0560 
Symbol 
ID4600603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp508160 
End bp508531 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID639773331 
ProductRNAse P, Rpr2/Rpp21 subunit 
Protein accessionYP_919969 
Protein GI119719474 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2023] RNase P subunit RPR2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGGG ACGAGCGCGA AATCAGGGAT CTTGCAAGGC AAAGGATTAA GAGGCTCCTG 
GAGTTCGCCG CGAAGGTATA TCGCGTAGAG CCGCGCCTCG CCGACAGGTA CGGCGAGCTG
TCCCTGCTGA TAGCTAAGAA GGCGCGGCTC CACTACCCGG ACTTCCTCAA GGCTAGAGTG
TGCAGGAAGT GCGGAGCCTT CCTAGTCGTG GGTTTCTCCG CAAGAGTAAG AGTGAAAAAC
AGGGGCAAGA TGAAGTACAT CGCGGTTACC TGTCTCAGGT GCGGCTACAC GAGGCGGTAT
CCCTTGAAGA GGAGCGCCGT GCCGCCGAAG CCCTGGTACG TGCTTTACGG AGAGGTGGCC
GGGCATGATT AG
 
Protein sequence
MKRDEREIRD LARQRIKRLL EFAAKVYRVE PRLADRYGEL SLLIAKKARL HYPDFLKARV 
CRKCGAFLVV GFSARVRVKN RGKMKYIAVT CLRCGYTRRY PLKRSAVPPK PWYVLYGEVA
GHD