Gene Tpen_0549 details

Gene Information

• Locus tag: Tpen_0549
• ID: 4600513
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: +
• Start bp: 498135
• End bp: 498767
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639773320
• Product: hypothetical protein
• Protein accession: YP_919958
• Protein GI: 119719463
• COG category: [S] Function unknown
• COG ID: [COG1901] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTAG AGGTTTTAAG GGAGCTCGTT TTCAGAGAGA AGTTTAGCCG TGTATTCGTG 
GTTTTTTCAA ACACGGCTGC CACGGCTCCT GTATTCACGG TGTCCACTTT AGCCACGCTT 
GGCGGCAGGA TGGACGTCGT CGCGAGGTCC CTTATCAACG CTCTCTGGGA TCTCGAGAGC 
CAGAGGTTCA ACACGCTTCT CGTAGCTTTG CTGAACGGTC CACCGAATCC TCCGCTAGGC 
CTCTACGCGT GGAGGGTGCC CGCTGGTGGC AAGAGATCCG AGGGCTTTTT CGGTGGGCTA 
ATACTCGAAG CCCTTTCCGG CAAGAAGGTA GATGGGCTAC TCGTGGAGAA GGGCGCCCGG 
CTTGTAGACG TTGTATCGTT GCTCAAGGGG GCCGGCTACC CCGTATACCT GCTCGACGAG 
AACGGTCTTA GCTACGCCAA CGTCAACCTC GAGGAGCCGG TAGCCTTTGT GCTAGGTGAC 
CACATAGGGA TACCCGCGGA CCTTCTGCGC CAGGTAACAA GACTAGTAGA CGGAGTGATA 
AGCATCGGGA GAACTCCCTA CTTAACGAGC CACTGCATCG CTTTCGTACA CGAACTGCTT 
GACCGGTCGT CGCGTCTACG CCGCCACGCG TAG 

 

Protein sequence

MSLEVLRELV FREKFSRVFV VFSNTAATAP VFTVSTLATL GGRMDVVARS LINALWDLES 
QRFNTLLVAL LNGPPNPPLG LYAWRVPAGG KRSEGFFGGL ILEALSGKKV DGLLVEKGAR 
LVDVVSLLKG AGYPVYLLDE NGLSYANVNL EEPVAFVLGD HIGIPADLLR QVTRLVDGVI 
SIGRTPYLTS HCIAFVHELL DRSSRLRRHA