| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0544 |
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| Symbol | |
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| ID | 4600501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 493876 |
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| End bp | 495510 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639773315 |
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| Product | membrane protein-like |
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| Protein accession | YP_919953 |
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| Protein GI | 119719458 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3356] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGGGA CTCATGGAGA CCACTTCGAG GGATTCAAAA GTAGCTATAA GTGGATTATC
AGGCTACCCG CTACACGTGT TCTTGCACCG ATCTCATTCT CGTTGCTACT ACTTTCCCTT
GGAGCCTCCT TGCTACTAGG AGTGCCGCCA AGCGAGTTAC TTCACTCGCT CTTACTGGGA
GCCGCCGTCC CGCTCTACCT CCACGTATGC GATAGGAGAG TGTTTAACTT CAGGCGTTCT
CTAGGGGTGT TCCTCCTGTA CCTCGCAATG CTCCCACTAG TGCTTGTACT CCGCAAGCCC
CCCATACTGG CCACGGTGCT CGAGGGGCTT GTCGGCTTTC TGCTCGCAGT CGGCATCCTA
AGCGTATGGA AAGCCGGCGC TCTGGCTATA CTCTACTTCC TTTGGTTCTC CGTAGCGCAC
AACGACCCCC GCGCACTGTA CATCCTCTCA GCCTTCTTCC TGGCGTCTTC TACTGTATTC
TTCGTGGTCG ACCGCAGGAT AAGGAAGGCG GCGGGAGTGA GCGGGGTAGG CTTCCTCGAG
GCGTTCCTGA AGTACATCCT TTCGGGGGCT CGGTCAGAGG TCGAGGAATA CCTTGAGAGA
ATATCCGTCG AAAGGACCCT GCAGGTACAT GTCTACTCGT TCACAGCCGA TCGCGAAATC
GGGCGCCTCG TGATTTCCAA CGTGCACCCG GGTCCTCTCA GAGACTTGGG TAGTAGCACT
CTGCCACAAC TCATCGCGAA GTGTAGGGAT ACACCAACGC TGTTTTTGAA GGCTCCGTGT
ACTCACTCGG AAAATCTTCC CAGGCTCAGG TACTCCGAGG AGCTGGCAGG CGCCGTGTGC
AGCTGCACGC CTAGCCCCGC GGTTGACAGG TGCGGTTTAG GCTACTCCTC TAGTGGAAAA
GTAGACGTTG TAAGGCTTGC TTTCGGCGAG ATACCGGACC TGGTGTTCCT GGACCCCCAG
GTGATCATGG AGGACTTGCC GTACAGGGTT TCGGAGGAGT CCCACGCCGT GGAGGGGGCC
GTAGCGGTAG ACCTCCACAA CATGATAGCT CCCGGCTACC TGAAGATAGA CGAAGACGAC
GAAATCGAAA TTGCCGAAAT CGTTTCCGCG ATTCACGAGG CGTCCGAGGA GGTTGAAGCA
GAGGGAGAGA TTTACGCCGG CTTCGCGCGT GTAGAATACA CTGATGGAGC CTCCGTAGGT
CCCGGCGGGG TTGCATGCGC CGTGCTTCAA ATAGCCGGCA AGAAACTCCT CTTGCTGAGC
ATAGACGGAA ACAACATGAC GCCAGACTTC AAGGAACGCG TTTTACGCAC GTTCAAGGAG
TCCTTCGAAA AAGTCTTGGT CGCGACTACG GATACCCACC TATACACGGG GCTATACAGG
AACGTCGACT ACTACCCAGT AGGAGCGCTG AGCCCCGAAA AAGTCCTGGA AACCTGTATG
TCTTGCGTTG AAAAAGCTTT GAAAAACGTC TCGAAGGTTA GGGTGGGTTA CTGCTCAGTG
CCATTCAGAG GCAGGTTCAT GGACGGCGAG ATGCTCCGCC GCATCTCTGT TGCAACGAAG
AAAAACACTA GGGACAGCCT AGCCGTAGTC TTTCTGGCGT TTGCTGTCTC GCTAGCCCTT
CTCCTGCTCC CGTAG
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| Protein sequence | MIGTHGDHFE GFKSSYKWII RLPATRVLAP ISFSLLLLSL GASLLLGVPP SELLHSLLLG
AAVPLYLHVC DRRVFNFRRS LGVFLLYLAM LPLVLVLRKP PILATVLEGL VGFLLAVGIL
SVWKAGALAI LYFLWFSVAH NDPRALYILS AFFLASSTVF FVVDRRIRKA AGVSGVGFLE
AFLKYILSGA RSEVEEYLER ISVERTLQVH VYSFTADREI GRLVISNVHP GPLRDLGSST
LPQLIAKCRD TPTLFLKAPC THSENLPRLR YSEELAGAVC SCTPSPAVDR CGLGYSSSGK
VDVVRLAFGE IPDLVFLDPQ VIMEDLPYRV SEESHAVEGA VAVDLHNMIA PGYLKIDEDD
EIEIAEIVSA IHEASEEVEA EGEIYAGFAR VEYTDGASVG PGGVACAVLQ IAGKKLLLLS
IDGNNMTPDF KERVLRTFKE SFEKVLVATT DTHLYTGLYR NVDYYPVGAL SPEKVLETCM
SCVEKALKNV SKVRVGYCSV PFRGRFMDGE MLRRISVATK KNTRDSLAVV FLAFAVSLAL
LLLP
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