Gene Tpen_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0538 
Symbol 
ID4601051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand- 
Start bp488764 
End bp489372 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content54% 
IMG OID639773308 
ProductXRE family transcriptional regulator 
Protein accessionYP_919947 
Protein GI119719452 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAAA TGCATCGAAC CTATTACTTT TTTGGTATGC CGATACCCTC CCCCGAAGAA 
CTCCGGCTAC TACGGTTACG CGCAGGGTTA ACGCAGGTTG AACTGGCCCA AAGGGCGGGG 
GTGAGCCAGA GCCTTATAGC GAGGATAGAG GCGGGCAAGG TTAACCCTCG AGTCTCCACT 
CTCATGAAGA TATACCGTGC GCTTGAGAGC TTCATGGAGG AGGAGCTCAC GGCTTGCGAG 
GTTATGTCGT CGCCACTCGT CTACGTAAAG CCTTCCACTA GCCTACTCGA AGTGGCTAGG 
ATCATGTGGG AGAAAGGTTT CAGCCAGCTA CCCGTCATAG ACGACTCGTC GAACGAAAAC 
TTGGGCACAG TGTTCGACGA CGACGTTCTA CGGGCATTCA TACGCGAAAA TACCCGCGCA 
GCCCAGCTCA CGGCTGCCGA CGTAATGTCG GACCCCCTGC CCATAATATC CTGCGGGACC 
AAGATACGCG TTGTTGCCAG AATGCTCGGG AGAGGCGTCC CCGCCGTACT GGTGGAGGAC 
GAGATGAAGA TCAAGGGGAT AATTACGAAG AGCGATATTG CGAAGCTTCT CGTAGTCTCC 
GTAAAGTAG
 
Protein sequence
MLKMHRTYYF FGMPIPSPEE LRLLRLRAGL TQVELAQRAG VSQSLIARIE AGKVNPRVST 
LMKIYRALES FMEEELTACE VMSSPLVYVK PSTSLLEVAR IMWEKGFSQL PVIDDSSNEN 
LGTVFDDDVL RAFIRENTRA AQLTAADVMS DPLPIISCGT KIRVVARMLG RGVPAVLVED 
EMKIKGIITK SDIAKLLVVS VK