| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0478 |
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| Symbol | |
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| ID | 4602037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 434006 |
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| End bp | 435772 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773246 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_919890 |
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| Protein GI | 119719395 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.738253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGG AATTGCGCGC ACAGGTGGAG GCTCTAATAC CCTATAAGAC TGTCAGGAAG
GGCCAGCTCG AGCTAGCTTT GGAAGTTGCC AAGGCGTATG CCGAGAAGGC GATCCTGCTT
GCACGCTATC CTACTGGTAT AGGGAAGACG GCGGCTGTGC TTGCCGGAGC TCTCGCGTCG
GGTGCCCCCA AAGTCGTGTA TCTCGCGCGG TCTAAGTCAC AGTTCCAGGC TCCTTTAAGG
GAGGTTAAAA GGCTCTTGGA GAGGGGTATA AGCGTTCCCA CCGTAGTCCT CGTGAACAAG
AAGAACTACT GCCTACTGAG AGGGGCCCTT CCGCTGGACT ACGAGGAATT TCTCCACTTC
TGCCGGGTTA AGAGATTCAC GGGGGCGTGC CCCTACTCTT CGGAGTTTGA AGACGCAGAA
ATCCCCGTCC TGGTGACCCC TAAGAGTGCC AGGTCTTTAG GTGCGAAGCT AGGGGTATGC
CCCTTTGAGC TAGCCTGGAA GGCCTTAAGG AAAGCTAGGC TCGTCGTCGC ATCCTATCCT
TACGTCTTCC GCGAAGATCT GCGGAGGCTT CTCGTCGAAA GCCTAGGCAC CCCGATGGAT
GTTTTAATGC TCGTAGTCGA TGAGGCCCAC AACTTGCCGG ATCATATAGC CGAGTCTACC
GCGATAGCCG TCTCGGACGC AACGCTGAGA AGAGCTATTT CGGAACTGAG AGCGGCAGGC
ATAGGGCAGG AGCTTGCCTC CTCGCTTTCC AACCTATTAG GTTACATGAA GAGGATTAAA
GGAGCTGAGG AAGGTGTAAG AATACCTCTG GATGAGCTTA CGTACCTAGT TCCTCCAGCG
GACGAGGTTA AGAGGGTCGC CCTGGCTCTG GAGAAGCTTA CAGGCATGTA CTCAAGTTTG
TGGCAACTCT ACGCGTTCGC CGAGGCTTTG AGACGCGCGT CACACGAGTA TCTAGTAACC
GCAGTGTCGA GCGACGGATC GGTATCGTTG AAGCTTGTAC TTATAAATCC TGGGAAGGTG
TCTAGGGAAG TTTTCCCCAA AGTTAGAAGT GCCGTGCTGA TGTCGTCGAC GCTTATGCCG
GCAGAATACT ACGTGGCTGT CCTGGGCTTT CCCGGAGAGA GAGTAAGGGA AGTCTCCTAC
CCCTTTGTGT GGAGCGAAAA CGTTGACGTT GTCATAGTTA AGGGTATATC GTCCAGGTAC
GTCGAGCGCG GAGAGGAACT CTACAGGCGG TACGCAAGCG CAATAGACTA CATTTTCGAG
CTTCCCAGTA CTAGGAGGGC TCTAGCCATC TTCCCTTCCT ACTCCTTCAT GATGGGCGTT
TATCCCTACA TACGCTCAAA GCCCGTTATC ATCGAGAGGC GGGATTCCAC TATAGGCTCT
ATGCTTGGGA AGGTGCTCGA ACTCGAGAAA GCCCTGCTCC TCGTAGTTGC GCGCGGAAAG
TTCGCCGAGG GGGTTGAGTT CACGGTGCTT GGAAAGTCTC TCATAGACAC GATCGTGATA
GCCGGGCTAC CCGTCCCGGA GCCTTCGGTG GAGAACGAAA AGCTCTACGA GCTACTTCAA
GAAAGGCTGG GCGACAGGGA TCTTGCATGG AAGTACGTCT ACCTTTATCC CGCCTTTATG
CAAGTAGTGC AAGGCATAGG TAGGGGTGTT CGAAGCGAGA AGGATAAAGT GAAGGTGTTC
ATATTGGATG AGCGCATGAT AGGAGAGGGT GAAAAGTACC TGTCTATGTA CGGGCTCGTC
CCCCGCGTAG GGAAGCTCCC CCTGTAG
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| Protein sequence | MSEELRAQVE ALIPYKTVRK GQLELALEVA KAYAEKAILL ARYPTGIGKT AAVLAGALAS
GAPKVVYLAR SKSQFQAPLR EVKRLLERGI SVPTVVLVNK KNYCLLRGAL PLDYEEFLHF
CRVKRFTGAC PYSSEFEDAE IPVLVTPKSA RSLGAKLGVC PFELAWKALR KARLVVASYP
YVFREDLRRL LVESLGTPMD VLMLVVDEAH NLPDHIAEST AIAVSDATLR RAISELRAAG
IGQELASSLS NLLGYMKRIK GAEEGVRIPL DELTYLVPPA DEVKRVALAL EKLTGMYSSL
WQLYAFAEAL RRASHEYLVT AVSSDGSVSL KLVLINPGKV SREVFPKVRS AVLMSSTLMP
AEYYVAVLGF PGERVREVSY PFVWSENVDV VIVKGISSRY VERGEELYRR YASAIDYIFE
LPSTRRALAI FPSYSFMMGV YPYIRSKPVI IERRDSTIGS MLGKVLELEK ALLLVVARGK
FAEGVEFTVL GKSLIDTIVI AGLPVPEPSV ENEKLYELLQ ERLGDRDLAW KYVYLYPAFM
QVVQGIGRGV RSEKDKVKVF ILDERMIGEG EKYLSMYGLV PRVGKLPL
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