Gene Tpen_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0460 
Symbol 
ID4600987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp421036 
End bp421569 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content55% 
IMG OID639773227 
Producthypothetical protein 
Protein accessionYP_919872 
Protein GI119719377 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAGAG TATTCAATGT CGTGATACCT CGAAGTAGAT TCGTAGACGA CGTGCCGCTG 
GTGTGCAGGG TTGTTACGTC GGCGATCTTT CTATCGCACG ATATCCGGCG CGATGTTACC
CTTCGCTTCG TGATGCCGGA TGCAGGGCTC TCGGTTTCCT TTCTATCCTC CAGGCTGAGG
CACGTGCACG TGGATGAGCA GTCGTTCGCC GGGCTACATC GAAGGATAGT TAGGGCAATG
TGGGAGGTAG AATCCGAGGG TGGAGCCAGG CACCCGCACA GCGGTATAAG CGTGGAGAGG
ATTGCTGGCA ACGTAGAGGA GCAATTCGGC GGTTCGTTCC TCGTATCTAG CGACGGCGAG
CTCTTGGCAG ATGTTCTGAG GCGCCTAGGG GAGGTAAGGG AAATTTCTCT AGTGTTCAGC
GCGGGGTTCC AGGTGAGGGT ACCGAGGAGG GTGAGAGTCT CTGTTGAGAG AAAAAACTTG
GACGTCTTGA TCGTAATTGC GAACATTGAG ATAGACAACT ACCTAGGGGC CTGA
 
Protein sequence
MRRVFNVVIP RSRFVDDVPL VCRVVTSAIF LSHDIRRDVT LRFVMPDAGL SVSFLSSRLR 
HVHVDEQSFA GLHRRIVRAM WEVESEGGAR HPHSGISVER IAGNVEEQFG GSFLVSSDGE
LLADVLRRLG EVREISLVFS AGFQVRVPRR VRVSVERKNL DVLIVIANIE IDNYLGA