| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0445 |
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| Symbol | |
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| ID | 4601868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | - |
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| Start bp | 403135 |
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| End bp | 404949 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639773212 |
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| Product | type II secretion system protein |
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| Protein accession | YP_919857 |
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| Protein GI | 119719362 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.179017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAG CATCGCTTGA CGGGATAGCG TACTCTTTGT TTGGCTGGGC TGGTGAAGCT
ATAGCAAGGA TGGTTCCGAC CCTTAGAAGC GATATTGTCT CAGCGGACAT GAAGGTGTAT
CCTCCGGCGT ACGCGTCCAG AGTTGTTTTT CTGTCCATCA TAGCCCTGGT TCTAGGCTTC
GTGTTCGACG TGCCGATAGT GATTCTACTC TCGAGAATGG GGGTCGGCTT GGGAGGAGTC
CTGGCTACGA GCTTCTCGGT ACCCCTCATG CTCGCCGGCG CGGTATTCGG CCTCGGCCTC
GTATACCCCA AGATCAAGCT GTCGAACAGG ACAAGCAGGT TTGACCTGGA GGTCCCCTAT
CTTTCTGTCT ACATAACCGT CATGGCGACT GGAGGTATCT CGCCGTATAC GAGCTTCGAG
CGCCTAGCTA AGGCCCCGAA GGTGCTTTTC CAGGAGATAA AGAAGGAGGC GATGTACTTC
TTCCTGAAGG TTAAGGGAAT GGGCCAAGAT CCTCTCTCGG CGATAGAGGA CAGTGCTAAG
CGCGTACCGC ACAACGGCTA CAAGCAACTA ATGCTGGGTT ACGCGGCAAC TTTGAGGGCT
GGAGGCGACG TTGTCCACTA CCTTCAAAGG CAGACAGAGG TCATGCTACG CGAAAGAGTA
TCGCAGATGA AGACTATAGG TGAGAGAATA GGAGCCCTCA TGGAGTCCTA CATGGCTATA
GTGTTGCTCA CCTCTATGAC GCTCTACGTC CTCTACGTTG TGAACATGGC GCTAGCCCAG
GCCGGGATGG GTCTCGCCGG CGGAGAAATT CAGTTCGTAA TGGTGTCGTA CATCATTATG
CCGATGCTTT CGGGGCTCTT CATATACCTA GCCGATCTCA TGCAACCCAA GTACCCCGTG
TACGACTCAA CGCCGTATGT CGTGTACTTG GCCTTGGGAA TACCCATAAC AATCTTCCTC
TTCGTCGCCA TGGTCCTCCC ATTCGCGGTA GCGCCTCCAG CCTCTACTGT GCTAAGGAGC
GTTTTCTCAC CCTTCGTCGG CGCCGTGTTG CTCCTGACGA GGCTCTTAGG GCTTGGGAAG
GGATACGAGA GCGGAGTTGG CATGATAATC TCGCTGACCC TGGGGCTCCT CCCGGCGATG
ATCGTAGAAA CGCGGTCAAC ACTGAAGTTC AGCGGTATAC AGTACGGGTT AACGAGGTTT
CTAAGGGACC TCGTCGAGGT TAGGAAAACC GGTATGGCGC CGGAGAAGTG CATAATTAAC
CTGAAGGACA GGGACTACGG GAAGTTTACC CCCTACCTCC GCGACATAGC TAAGCAGGTC
GGGTGGGGTG TGTCCCTTCA CACGATCTTT GAGAGATTTT CGAAGGGCAT GAAGAACTGG
TTCGCCCTTA TCTCGATGTT TCTACTCGTT GAGAGCATCG AAGTAGGAGG CGGCACGCCG
CAGACGCTAG AGGCGCTTGC AAGCTACGCT GAGACGCTAG AGCAAGTCGA GAAGGAGAAA
AGGGCGGCTT TGAGGCCGCT GATGCTAATG CCCTATGTGG GAGCGCTCAT AATAACGGTT
GTAGTCCTGA TCCTAGTAGA GTTCATGGGT TCCATGCTTA AATTCGCGGG AACAGCGATC
TCGACGGAAC AGCTTGTAGG AATGTTCCTG CCCCCGGTGA TCATTAATAG CTACATGATG
GGGCTAGCTG CCGGAAAGAT AGGTTCCGAG AGGGTCGCGG CGGGTTTCAA GCACGCGATC
CTGCTACTAC TCGCAAACCT CGTAGCCATG ATGATCGCTC CACAAATCAC GGCGGGGATG
ATGCCTAAAC TCTAG
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| Protein sequence | MARASLDGIA YSLFGWAGEA IARMVPTLRS DIVSADMKVY PPAYASRVVF LSIIALVLGF
VFDVPIVILL SRMGVGLGGV LATSFSVPLM LAGAVFGLGL VYPKIKLSNR TSRFDLEVPY
LSVYITVMAT GGISPYTSFE RLAKAPKVLF QEIKKEAMYF FLKVKGMGQD PLSAIEDSAK
RVPHNGYKQL MLGYAATLRA GGDVVHYLQR QTEVMLRERV SQMKTIGERI GALMESYMAI
VLLTSMTLYV LYVVNMALAQ AGMGLAGGEI QFVMVSYIIM PMLSGLFIYL ADLMQPKYPV
YDSTPYVVYL ALGIPITIFL FVAMVLPFAV APPASTVLRS VFSPFVGAVL LLTRLLGLGK
GYESGVGMII SLTLGLLPAM IVETRSTLKF SGIQYGLTRF LRDLVEVRKT GMAPEKCIIN
LKDRDYGKFT PYLRDIAKQV GWGVSLHTIF ERFSKGMKNW FALISMFLLV ESIEVGGGTP
QTLEALASYA ETLEQVEKEK RAALRPLMLM PYVGALIITV VVLILVEFMG SMLKFAGTAI
STEQLVGMFL PPVIINSYMM GLAAGKIGSE RVAAGFKHAI LLLLANLVAM MIAPQITAGM
MPKL
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