Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0368 |
Symbol | |
ID | 4600768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 334772 |
End bp | 336175 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639773129 |
Product | tRNA CCA-pyrophosphorylase |
Protein accession | YP_919780 |
Protein GI | 119719285 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1746] tRNA nucleotidyltransferase (CCA-adding enzyme) |
TIGRFAM ID | [TIGR03671] CCA-adding enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.243596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTGCC GTGATCCATG CGTCTTTAAG TACCCGGAGT GCCTTGAAGA AGTCCTGAAG AAAGTAAAGC CCAGCGCAGA GGATAAGAGA GCTCTCGACC TTTTCGCGGA GAGACTAATG GCGGTGGTGC TCGAGGAGGC GAATACGCGT GCAGGAGGAG AAGTGAGCGT AGAGCTTCAC GGCTCCTACA GGCACGATAC TTGGTTGAAA GGCGAGGCAG ACATAGACTT GTTCCTCTTA TTCCCGAAGA AGTATTCGCT GGAAGAGATG AAGGAGGTGG CCAGAAGAGT TTCTGAAGGT TCTTCTGCAA GGCTGGGCGC TCGAGTAGAG GAAAGGTATG CCTCCCATCC GTACTACACG CTAGTGTTCC CGAACAGCGT CGAAGTAGAT GTAGTGCCTG CATACAGGGT TTTTTCTCCA AGCGAGATAG TCACGCCTGT CGACAGGACG CAACTTCACA CTGCGTACCT CGAGAGAAAG CTGTCGGAGA AACCCTGGCT CAAGGACGAG ATACGCCTCT TGAAAAGGTT ACTAAAAAAC CTGGGAATCT ACGGCGCTGA GCAGAGCTTA AAGGGGTTCT CAGGATACCT AGCGGAGATA CTCGTCGTGT ACTACGACGG GCTCGAGAAG CTCCTACGCG AAGCGGCGCG GTGGCGTCCC GGCAAAGTCG CGGTGCCCGA CGGGAAGGAT CTTCTGGAAA GGTTCAAGGG ACAGCCGCTC GTGGTTCTTG ACCCCGTGGA TTCCAGGAGA AACGCGGCGG CGTCTGTGAG CCTTGACTCG TTGTCGAAGT TTATCCTTGC CGCCAAGATG TTCAGTGAAG ACGAGAACAT CCTGTGTTGC CTGTTAGACC CTCCGGAGCC CCGAGTGGAT CCAGACGAGG AACTGCCCCG CTTACTGAGT TCGCACAACG TTATTGCCGT GCTGGCACGT CGTCACCCCG AATTACCTGG CGATGCCTTG CTCGGCAAGA TGCAGAGAAT AGGCAAAAGC CTCGAGGGCT ACCTCGCAGG GCTAGGCTTT AAGGTTCTAA GGTTCAAGGC CACGTTGCTA TCTGGTACAC CGGCGTTGCT AGTAGAGCTG GAATCGCTTA CTTCGCCGAA GACGGTTCTA CACGTAGGAC CACCTGTTTG GCACCCCAAC GCGGGGAACT TTCTCAGGAA GTGGTCTACG AAGAGCTACG GTCCCTTCGT TTCAAACGGT AGGCTCGCCG TGATTAGAAA CGTGGTTTCA GAGGAAATCT CGGAGCACGT ATTATCGCTT TTGAAGAGCT ACGCGGGTTT TTCCTGGGAG GTTAAGGATT TGAGGAACAT ACTCCGCGAT TTATCAGCAG AGGAGAAGAA GGAGGTCTAC AGATGGTTGA GCAGTGTAGA ACCCTGGACA ATCTGCGCGC AATACATGAG TTAA
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Protein sequence | MTCRDPCVFK YPECLEEVLK KVKPSAEDKR ALDLFAERLM AVVLEEANTR AGGEVSVELH GSYRHDTWLK GEADIDLFLL FPKKYSLEEM KEVARRVSEG SSARLGARVE ERYASHPYYT LVFPNSVEVD VVPAYRVFSP SEIVTPVDRT QLHTAYLERK LSEKPWLKDE IRLLKRLLKN LGIYGAEQSL KGFSGYLAEI LVVYYDGLEK LLREAARWRP GKVAVPDGKD LLERFKGQPL VVLDPVDSRR NAAASVSLDS LSKFILAAKM FSEDENILCC LLDPPEPRVD PDEELPRLLS SHNVIAVLAR RHPELPGDAL LGKMQRIGKS LEGYLAGLGF KVLRFKATLL SGTPALLVEL ESLTSPKTVL HVGPPVWHPN AGNFLRKWST KSYGPFVSNG RLAVIRNVVS EEISEHVLSL LKSYAGFSWE VKDLRNILRD LSAEEKKEVY RWLSSVEPWT ICAQYMS
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